RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TCP11Q8WWU5 503 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 PSMB7Q99436 277 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 HINFPQ9BQA5 517 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 TCHPQ9BT92 498 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 IER2Q9BTL4 223 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 PARD6BQ9BYG5 372 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 CUEDC1Q9NWM3 386 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-213ENST00000496622 ADAMTS1Q9UHI8 967 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 SALL4Q9UJQ4 1053 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 FHOD1Q9Y613 1164 aa6.61□□□□□ -1.35
SSBP1-213ENST00000496622 hCG_2014768A0A024R1R8 64 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 GSTTP1A0A1W2PQM5 241 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 ZSCAN12O43309 604 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 OPA1O60313 960 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 SRGAP2O75044 1071 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 ERLIN1O75477 346 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 PLS3P13797 630 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 CD53P19397 219 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 RPL13P26373 211 aaKnown RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 PON1P27169 355 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 TCF7P36402 384 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 EIF4A3P38919 411 aaKnown RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 PPP1R2P41236 205 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 GCLMP48507 274 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 DNA2P51530 1060 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 ITIH3Q06033 890 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 SNAPC2Q13487 334 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 TOMM20Q15388 145 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 EDRF1Q3B7T1 1238 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 MICALCLQ6ZW33 695 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 FAM186BQ8IYM0 893 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 SLC35F6Q8N357 371 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 TMEM130Q8N3G9 435 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 CTNNBL1Q8WYA6 563 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 GLG1Q92896 1179 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 ZBTB45Q96K62 511 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 CCDC42Q96M95 316 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 C2orf49Q9BVC5 232 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 MLXIPQ9HAP2 919 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 GPAMQ9HCL2 828 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 CYP26B1Q9NR63 512 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 TOPORSQ9NS56 1045 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 NXF1Q9UBU9 619 aaKnown RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 PLAGL2Q9UPG8 496 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 COL11A1P12107 1806 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 NDUFB5O43674 189 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 CALUO43852 315 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 FOXD2O60548 495 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 CALCAP01258 141 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 EDN1P05305 212 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 UCHL3P15374 230 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 CNGA1P29973 690 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 JAK3P52333 1124 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 PPP3CAQ08209 521 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 CLPPQ16740 277 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 EXOC3L4Q17RC7 722 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 ERCC6LQ2NKX8 1250 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 PRAMEF19Q5SWL8 479 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 LCE2AQ5TA79 106 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 ZNF746Q6NUN9 644 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 HS2ST1Q7LGA3 356 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 PNMA8AQ86V59 439 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 VPS52Q8N1B4 723 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 TMEM161BQ8NDZ6 487 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 MMP19Q99542 508 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.6□□□□□ -1.35
SSBP1-213ENST00000496622 C1QTNF1Q9BXJ1 281 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 PACSIN1Q9BY11 444 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 ZNF304Q9HCX3 659 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 ZNF302Q9NR11 478 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 DCAF16Q9NXF7 216 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 GCNT4Q9P109 453 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 PRELID1Q9Y255 219 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 DOCK1Q14185 1865 aa6.6□□□□□ -1.35
SSBP1-213ENST00000496622 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 LSM1O15116 133 aaKnown RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 MTRF1O75570 445 aaKnown RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 GNRH1P01148 92 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 PSAPP07602 524 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 CCDC159P0C7I6 412 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 SUPT20HL2P0C7V6 817 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 EPB41P11171 864 aaKnown RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 ADORA2AP29274 412 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 SFNP31947 248 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 HALP42357 657 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 POLGP54098 1239 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 IGBP1P78318 339 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 ACAP1Q15027 740 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 TLR1Q15399 786 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 MEA1Q16626 185 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 BMT2Q1RMZ1 405 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 MAP7D1Q3KQU3 841 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 ZBTB41Q5SVQ8 909 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 CCDC122Q5T0U0 273 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 HGSNATQ68CP4 663 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 DPY19L2P1Q6NXN4 242 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 SLC39A4Q6P5W5 647 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 TAS1R3Q7RTX0 852 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 NANOGNBQ7Z5D8 188 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 ARHGAP22Q7Z5H3 698 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms