RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 HPS3Q969F9 1004 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 PPWD1Q96BP3 646 aaKnown RBP8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 MANSC1Q9H8J5 431 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 PPCSQ9HAB8 311 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 HESX1Q9UBX0 185 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 MYRFQ9Y2G1 1151 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 XDHP47989 1333 aa8.6□□□□□ -1.03
CRNKL1-205ENST00000496549 A0A087X0T9 212 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ARPC4-TTLL3A0A0A6YYG9 625 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 MINDY4BA8MYZ0 360 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 TNFRSF10AO00220 468 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 FAM228BP0C875 321 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 EEF1B2P24534 225 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ANXA13P27216 316 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 PTGS2P35354 604 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 FDFT1P37268 417 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 LIFRP42702 1097 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ST13P50502 369 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 CDK16Q00536 496 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 PRKG1Q13976 671 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 LRP8Q14114 963 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 FXNQ16595 210 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ISLR2Q6UXK2 745 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 Q6ZNX1 250 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 SH3RF1Q7Z6J0 888 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 GIMAP8Q8ND71 665 aaPredicted RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 UTP4Q969X6 686 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 RMND5BQ96G75 393 aaPredicted RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 SLX1AQ9BQ83 275 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 RNF38Q9H0F5 515 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 GNPTGQ9UJJ9 305 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 STXBP5LQ9Y2K9 1186 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 STK24Q9Y6E0 443 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 UNC13BO14795 1591 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 MYO3AQ8NEV4 1616 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 POTEB3A0JP26 581 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 FCHO1O14526 889 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 SH3BP5O60239 455 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 CAMTA2O94983 1202 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 TTC4O95801 387 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 BCL10O95999 233 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 P4HA1P13674 534 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 RAG1P15918 1043 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 SLC1A1P43005 524 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 IREB2P48200 963 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 TMPRSS15P98073 1019 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 SLC15A2Q16348 729 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 PDK4Q16654 411 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 CERKLQ49MI3 558 aaPredicted RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 RSBN1Q5VWQ0 802 aaPredicted RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 DUPD1Q68J44 220 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 TTI2Q6NXR4 508 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 TTC27Q6P3X3 843 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 POTEBQ6S5H4 581 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 CYP2U1Q7Z449 544 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 CATSPER3Q86XQ3 398 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 RFFLQ8WZ73 363 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ALKBH8Q96BT7 664 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ZKSCAN3Q9BRR0 538 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 TMEM120AQ9BXJ8 343 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 SOX13Q9UN79 622 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 NAALADL1Q9UQQ1 740 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 NCAPD2Q15021 1401 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ANKARQ7Z5J8 1434 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 CPDO75976 1380 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ABCC6O95255 1503 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ARHGEF37A1IGU5 675 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 PCP4L1A6NKN8 68 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ITGA6P23229 1130 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 RXRGP48443 463 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 SERPINB10P48595 397 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 VCPP55072 806 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 TIMM10P62072 90 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 OTUD4Q01804 1114 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 STX3Q13277 289 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 PKN1Q16512 942 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 TRAF7Q6Q0C0 670 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 DYMQ7RTS9 669 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ZNF654Q8IZM8 581 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 PLEKHA8Q96JA3 519 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 GBA3Q9H227 469 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 HMG20AQ9NP66 347 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 COPRSQ9NQ92 184 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 VPS45Q9NRW7 570 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 WARS2Q9UGM6 360 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 ASAP1Q9ULH1 1129 aa8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 CHD2O14647 1828 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-205ENST00000496549 NOP56O00567 594 aaKnown RBP8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 ZBED4O75132 1171 aa8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 MFN2O95140 757 aa8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 TRIM16O95361 564 aa8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 ALDH18A1P54886 795 aaKnown RBP8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 RRP1BQ14684 758 aaKnown RBP8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 KRT79Q5XKE5 535 aa8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 NXNQ6DKJ4 435 aa8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 ULK2Q8IYT8 1036 aa8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 CMTR1Q8N1G2 835 aaKnown RBP8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 WNK4Q96J92 1243 aa8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 ZFYVE19Q96K21 471 aa8.59□□□□□ -1.04
CRNKL1-205ENST00000496549 BIRC8Q96P09 236 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms