RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 KRT12Q99456 494 aa22.64■■□□□ 1.22
FGFR1-223ENST00000496296 OSMRQ99650 979 aa22.64■■□□□ 1.22
FGFR1-223ENST00000496296 GOLPH3Q9H4A6 298 aa22.64■■□□□ 1.22
FGFR1-223ENST00000496296 OSGEPQ9NPF4 335 aa22.64■■□□□ 1.22
FGFR1-223ENST00000496296 TAS2R14Q9NYV8 317 aa22.64■■□□□ 1.22
FGFR1-223ENST00000496296 VPS18Q9P253 973 aa22.64■■□□□ 1.22
FGFR1-223ENST00000496296 FAN1Q9Y2M0 1017 aa22.64■■□□□ 1.22
FGFR1-223ENST00000496296 PTPRJQ12913 1337 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 DDX3YO15523 660 aaKnown RBP22.64■■□□□ 1.21
FGFR1-223ENST00000496296 CEP104O60308 925 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 MYCNP04198 464 aaPredicted RBP22.64■■□□□ 1.21
FGFR1-223ENST00000496296 DARSP14868 501 aaKnown RBP22.64■■□□□ 1.21
FGFR1-223ENST00000496296 CHRNB2P17787 502 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 ZNF200P98182 395 aaPredicted RBP22.64■■□□□ 1.21
FGFR1-223ENST00000496296 GCNT1Q02742 428 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 DUOXA2Q1HG44 320 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 NBPF20Q3BBV1 942 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 MAP3K21Q5TCX8 1036 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 ALS2CLQ60I27 953 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 IMPG2Q9BZV3 1241 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 THAP2Q9H0W7 228 aa22.64■■□□□ 1.21
FGFR1-223ENST00000496296 NOC2LQ9Y3T9 749 aaKnown RBP22.64■■□□□ 1.21
FGFR1-223ENST00000496296 STAG3L1P0CL83 205 aa22.63■■□□□ 1.21
FGFR1-223ENST00000496296 EIF4BP23588 611 aaKnown RBP22.63■■□□□ 1.21
FGFR1-223ENST00000496296 CST5P28325 142 aaPredicted RBP22.63■■□□□ 1.21
FGFR1-223ENST00000496296 DNA2P51530 1060 aa22.63■■□□□ 1.21
FGFR1-223ENST00000496296 CLUL1Q15846 466 aa22.63■■□□□ 1.21
FGFR1-223ENST00000496296 CARD9Q9H257 536 aa22.63■■□□□ 1.21
FGFR1-223ENST00000496296 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.63■■□□□ 1.21
FGFR1-223ENST00000496296 DDX20Q9UHI6 824 aaKnown RBP22.63■■□□□ 1.21
FGFR1-223ENST00000496296 GTF2IRD1Q9UHL9 959 aa22.63■■□□□ 1.21
FGFR1-223ENST00000496296 B4GALT4O60513 344 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 ASGR1P07306 291 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 PRMT2P55345 433 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 DCAF4L1Q3SXM0 396 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 RPUSD2Q8IZ73 545 aaKnown RBP22.62■■□□□ 1.21
FGFR1-223ENST00000496296 CEP120Q8N960 986 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 OR5B17Q8NGF7 314 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 SH3GL2Q99962 352 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 SLITRK6Q9H5Y7 841 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 M0QZ92 97 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 RAD51CO43502 376 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 TNNC2P02585 160 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 TMEM191BP0C7N4 346 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 USP8P40818 1118 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 KCNA10Q16322 511 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 FAM47CQ5HY64 1035 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 RNF180Q86T96 592 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 RSPH3Q86UC2 560 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 KLHDC9Q8NEP7 349 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 KAT5Q92993 513 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 ANKRD36BP1Q96IX9 119 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 PI4K2AQ9BTU6 479 aa22.62■■□□□ 1.21
FGFR1-223ENST00000496296 GOLGA6BA6NDN3 693 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 TMCO5BA8MYB1 307 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 RNF40O75150 1001 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 VNN1O95497 513 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 FTLP02792 175 aaPredicted RBP22.61■■□□□ 1.21
FGFR1-223ENST00000496296 RPLP2P05387 115 aaKnown RBP22.61■■□□□ 1.21
FGFR1-223ENST00000496296 CXCL8P10145 99 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 FGFR4P22455 802 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 AXLP30530 894 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 CRYBB1P53674 252 aaPredicted RBP22.61■■□□□ 1.21
FGFR1-223ENST00000496296 GPC5P78333 572 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 GUCY2DQ02846 1103 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 NCOA4Q13772 614 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 NOTUMQ6P988 496 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 NOP9Q86U38 636 aaKnown RBP22.61■■□□□ 1.21
FGFR1-223ENST00000496296 SLAIN1Q8ND83 568 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 WHAMMQ8TF30 809 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 CASKIN2Q8WXE0 1202 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 TATDN2Q93075 761 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 FAM84AQ96KN4 292 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 CDHR5Q9HBB8 845 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 EPB41L5Q9HCM4 733 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 COG5Q9UP83 839 aa22.61■■□□□ 1.21
FGFR1-223ENST00000496296 SGPL1O95470 568 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 ABCB4P21439 1286 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 CARSP49589 748 aaKnown RBP22.6■■□□□ 1.21
FGFR1-223ENST00000496296 TFAMQ00059 246 aaKnown RBP22.6■■□□□ 1.21
FGFR1-223ENST00000496296 PPP2R5EQ16537 467 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 SLC27A1Q6PCB7 646 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 ZNF296Q8WUU4 475 aaPredicted RBP22.6■■□□□ 1.21
FGFR1-223ENST00000496296 PCDHB18PQ96TA0 734 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 MTMR12Q9C0I1 747 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 ASB7Q9H672 318 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 MIF4GDA9UHW6 222 aaKnown RBP22.6■■□□□ 1.21
FGFR1-223ENST00000496296 GGCXP38435 758 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 MRPS25P82663 173 aaKnown RBP22.6■■□□□ 1.21
FGFR1-223ENST00000496296 FMO1Q01740 532 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 TRPC3Q13507 836 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 CUL1Q13616 776 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 SNX17Q15036 470 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 SEC14L1Q92503 715 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 ACAP3Q96P50 834 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 RPS6KC1Q96S38 1066 aa22.6■■□□□ 1.21
FGFR1-223ENST00000496296 TBXAS1P24557 533 aaPredicted RBP22.59■■□□□ 1.21
FGFR1-223ENST00000496296 CDR2Q01850 454 aa22.59■■□□□ 1.21
FGFR1-223ENST00000496296 SEPT11Q9NVA2 429 aaKnown RBP22.59■■□□□ 1.21
FGFR1-223ENST00000496296 CABYRO75952 493 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms