RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 EIF3CLB5ME19 914 aaKnown RBP18.78■□□□□ 0.6
PSMB4-206ENST00000495288 CCP110O43303 1012 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 CXCL10P02778 98 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 ACO1P21399 889 aaKnown RBP18.78■□□□□ 0.6
PSMB4-206ENST00000495288 CLCN1P35523 988 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 RAP1GAPP47736 663 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 CDH8P55286 799 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 KRT83P78385 493 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 CYP27A1Q02318 531 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 TMEM270Q6UE05 265 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 LRRC52Q8N7C0 313 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 GSTCDQ8NEC7 633 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 EIF3CQ99613 913 aaKnown RBP18.78■□□□□ 0.6
PSMB4-206ENST00000495288 AGPAT1Q99943 283 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 SEPT11Q9NVA2 429 aaKnown RBP18.78■□□□□ 0.6
PSMB4-206ENST00000495288 PCDHB7Q9Y5E2 793 aa18.78■□□□□ 0.6
PSMB4-206ENST00000495288 ANO9A1A5B4 782 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 TRIM43BA6NCK2 446 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 PIRO00625 290 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 STAU1O95793 577 aaKnown RBP18.77■□□□□ 0.6
PSMB4-206ENST00000495288 TIMP1P01033 207 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 CALCAP01258 141 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 RAG1P15918 1043 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 ASPAP45381 313 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 BPIFB4P59827 614 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 GFPT1Q06210 699 aaPredicted RBP18.77■□□□□ 0.6
PSMB4-206ENST00000495288 TAF3Q5VWG9 929 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 FAM43BQ6ZT52 329 aaPredicted RBP18.77■□□□□ 0.6
PSMB4-206ENST00000495288 KIAA1328Q86T90 577 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 SLC47A2Q86VL8 602 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 RBBP8NLQ8NC74 664 aaPredicted RBP18.77■□□□□ 0.6
PSMB4-206ENST00000495288 SLC20A1Q8WUM9 679 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 TRIM43Q96BQ3 446 aaPredicted RBP18.77■□□□□ 0.6
PSMB4-206ENST00000495288 ZNF560Q96MR9 790 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 SMYD3Q9H7B4 428 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 VRTNQ9H8Y1 702 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 CISHQ9NSE2 258 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 ADAMTS1Q9UHI8 967 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 SNX9Q9Y5X1 595 aa18.77■□□□□ 0.6
PSMB4-206ENST00000495288 CENPFP49454 3210 aa18.77■□□□□ 0.59
PSMB4-206ENST00000495288 KIAA0355O15063 1070 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 FGFR1P11362 822 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 RFC2P35250 354 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 PNPLA4P41247 253 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 MAGEA1P43355 309 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 ASTE1Q2TB18 679 aaPredicted RBP18.76■□□□□ 0.59
PSMB4-206ENST00000495288 RPUSD2Q8IZ73 545 aaKnown RBP18.76■□□□□ 0.59
PSMB4-206ENST00000495288 URGCPQ8TCY9 931 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 FAXDC2Q96IV6 333 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 PPP1R13BQ96KQ4 1090 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 BCO2Q9BYV7 579 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 SDCBP2Q9H190 292 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 CYP3A43Q9HB55 503 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 ACP6Q9NPH0 428 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 TMEM161AQ9NX61 479 aa18.76■□□□□ 0.59
PSMB4-206ENST00000495288 PUF60Q9UHX1 559 aaKnown RBP18.76■□□□□ 0.59
PSMB4-206ENST00000495288 RALGAPA2Q2PPJ7 1873 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 A0A087X0T9 212 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 CASTOR2A6NHX0 329 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 FAM228BP0C875 321 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 CYP11B1P15538 503 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 LRPAP1P30533 357 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 TAF6P49848 677 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 GRIK3Q13003 919 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 IKBKEQ14164 716 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 SV2CQ496J9 727 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 ZNF394Q53GI3 561 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 NOMO2Q5JPE7 1267 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 CCDC122Q5T0U0 273 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 NOP9Q86U38 636 aaKnown RBP18.75■□□□□ 0.59
PSMB4-206ENST00000495288 GLYCTKQ8IVS8 523 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 REXO1L1PQ8IX06 675 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 ABI1Q8IZP0 508 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 UBR7Q8N806 425 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 RABGGTAQ92696 567 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 ELAC1Q9H777 363 aaKnown RBP18.75■□□□□ 0.59
PSMB4-206ENST00000495288 CACNG4Q9UBN1 327 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 REXO2Q9Y3B8 237 aaKnown RBP18.75■□□□□ 0.59
PSMB4-206ENST00000495288 PCDHA13Q9Y5I0 950 aa18.75■□□□□ 0.59
PSMB4-206ENST00000495288 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.75■□□□□ 0.59
PSMB4-206ENST00000495288 TRIP11Q15643 1979 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 KPNA7A9QM74 516 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 DDX3XO00571 662 aaKnown RBP eCLIP18.74■□□□□ 0.593e-7■■□□□ 12.9
PSMB4-206ENST00000495288 PODXLO00592 558 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 ZNF263O14978 683 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 ZNF500O60304 480 aaPredicted RBP18.74■□□□□ 0.59
PSMB4-206ENST00000495288 ANXA13P27216 316 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 RPL9P32969 192 aaKnown RBP18.74■□□□□ 0.59
PSMB4-206ENST00000495288 PDE6CP51160 858 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 NAB2Q15742 525 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 SLC18A3Q16572 532 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 CLLU1OSQ5K130 101 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 CNKSR3Q6P9H4 555 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 TMEM199Q8N511 208 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 PDCL3Q9H2J4 239 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 KCND1Q9NSA2 647 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 NOCTQ9UK39 431 aaKnown RBP18.74■□□□□ 0.59
PSMB4-206ENST00000495288 CNTN6Q9UQ52 1028 aa18.74■□□□□ 0.59
PSMB4-206ENST00000495288 TMCO5BA8MYB1 307 aa18.73■□□□□ 0.59
PSMB4-206ENST00000495288 SPTLC1O15269 473 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms