RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CD2BP2O95400 341 aaKnown RBP24.03■■□□□ 1.44
HDDC3-203ENST00000494993 AARSP49588 968 aaKnown RBP eCLIP24.03■■□□□ 1.44
HDDC3-203ENST00000494993 GRM2Q14416 872 aa24.03■■□□□ 1.44
HDDC3-203ENST00000494993 KYAT1Q16773 422 aa24.03■■□□□ 1.44
HDDC3-203ENST00000494993 ZNF852Q6ZMS4 543 aa24.03■■□□□ 1.44
HDDC3-203ENST00000494993 GPBP1Q86WP2 473 aa24.03■■□□□ 1.44
HDDC3-203ENST00000494993 LEMD2Q8NC56 503 aa24.03■■□□□ 1.44
HDDC3-203ENST00000494993 BEST2Q8NFU1 509 aa24.03■■□□□ 1.44
HDDC3-203ENST00000494993 CALML4Q96GE6 196 aa24.03■■□□□ 1.44
HDDC3-203ENST00000494993 TBX20Q9UMR3 447 aa24.03■■□□□ 1.44
HDDC3-203ENST00000494993 TIMM13Q9Y5L4 95 aaPredicted RBP24.03■■□□□ 1.44
HDDC3-203ENST00000494993 NUP210Q8TEM1 1887 aaPredicted RBP24.02■■□□□ 1.44
HDDC3-203ENST00000494993 LACTBL1A8MY62 500 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 HNRNPDLO14979 420 aaKnown RBP24.02■■□□□ 1.44
HDDC3-203ENST00000494993 NCAM2O15394 837 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 XPOTO43592 962 aaKnown RBP24.02■■□□□ 1.44
HDDC3-203ENST00000494993 FAM189A1O60320 539 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 KINO60870 393 aaKnown RBP24.02■■□□□ 1.44
HDDC3-203ENST00000494993 MOSPD3O75425 235 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 PIGRP01833 764 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 EPHA5P54756 1037 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 LRRC15Q8TF66 581 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 OXCT2Q9BYC2 517 aaPredicted RBP24.02■■□□□ 1.44
HDDC3-203ENST00000494993 BRD9Q9H8M2 597 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 ASAH2Q9NR71 780 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 MRPS17Q9Y2R5 130 aaKnown RBP24.02■■□□□ 1.44
HDDC3-203ENST00000494993 YIPF1Q9Y548 306 aa24.02■■□□□ 1.44
HDDC3-203ENST00000494993 SHISA7A6NL88 538 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 K7ENM7 598 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 OGTO15294 1046 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 MYL4P12829 197 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 SCP2P22307 547 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 UBA7P41226 1012 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 RPS9P46781 194 aaKnown RBP24.01■■□□□ 1.43
HDDC3-203ENST00000494993 GUCY2FP51841 1108 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 ZNF131P52739 623 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 DHX8Q14562 1220 aaKnown RBP24.01■■□□□ 1.43
HDDC3-203ENST00000494993 ENOX2Q16206 610 aaKnown RBP24.01■■□□□ 1.43
HDDC3-203ENST00000494993 ERMP1Q7Z2K6 904 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 MYCT1Q8N699 235 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 RUBCNQ92622 972 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 SMARCD2Q92925 531 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 ZSWIM3Q96MP5 696 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 TRMT61BQ9BVS5 477 aaKnown RBP24.01■■□□□ 1.43
HDDC3-203ENST00000494993 RPF1Q9H9Y2 349 aaKnown RBP24.01■■□□□ 1.43
HDDC3-203ENST00000494993 PARVGQ9HBI0 331 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 BLOC1S4Q9NUP1 217 aa24.01■■□□□ 1.43
HDDC3-203ENST00000494993 CACNA1AO00555 2505 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 FAM13AO94988 1023 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 VNN2O95498 520 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 ADRB2P07550 413 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 OR4Q2P0C623 313 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 GJA1P17302 382 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 CSTF1Q05048 431 aaKnown RBP24■■□□□ 1.43
HDDC3-203ENST00000494993 VITQ6UXI7 678 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 DSTYKQ6XUX3 929 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 USP37Q86T82 979 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 KIAA2013Q8IYS2 634 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 SUMF1Q8NBK3 374 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 BORCS6Q96GS4 357 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 PGLYRP2Q96PD5 576 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 TSPAN18Q96SJ8 248 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 HINFPQ9BQA5 517 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 SMC3Q9UQE7 1217 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 GPR179Q6PRD1 2367 aa24■■□□□ 1.43
HDDC3-203ENST00000494993 CEP250Q9BV73 2442 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 OR6C75A6NL08 312 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 PSMC3P17980 439 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 FZD5Q13467 585 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 MCM6Q14566 821 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 MAP4K3Q8IVH8 894 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 ZSCAN18Q8TBC5 510 aaPredicted RBP23.99■■□□□ 1.43
HDDC3-203ENST00000494993 DEPDC1BQ8WUY9 529 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 IRF7Q92985 503 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 TRPV4Q9HBA0 871 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 PCDHGA2Q9Y5H1 932 aa23.99■■□□□ 1.43
HDDC3-203ENST00000494993 A0A0B4J269 797 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 MAN2B1O00754 1011 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 PPEF2O14830 753 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 SPTLC1O15269 473 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 TRAK2O60296 914 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 BMP15O95972 392 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 PLCG1P19174 1290 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 TYMPP19971 482 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 GDI1P31150 447 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 MCM2P49736 904 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 GPR17Q13304 367 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 PLD1Q13393 1074 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 TEAD2Q15562 447 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 SPATA1Q5VX52 437 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 OVOS1Q6IE37 1185 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 CD302Q8IX05 232 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 SHKBP1Q8TBC3 707 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 RAD54LQ92698 747 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 MSTO1Q9BUK6 570 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 LRRC3Q9BY71 257 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 CRISPLD1Q9H336 500 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 ZNF334Q9HCZ1 680 aaPredicted RBP23.98■■□□□ 1.43
HDDC3-203ENST00000494993 TRPV5Q9NQA5 729 aa23.98■■□□□ 1.43
HDDC3-203ENST00000494993 DENND4CQ5VZ89 1909 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms