RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 PRPF40AO75400 957 aaKnown RBP17.21■□□□□ 0.35
LIME1-209ENST00000494776 TNNC2P02585 160 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 ITGB3P05106 788 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 WEE2P0C1S8 567 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 ODC1P11926 461 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 TNNI1P19237 187 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 POLR2BP30876 1174 aaKnown RBP17.21■□□□□ 0.35
LIME1-209ENST00000494776 MTHFRP42898 656 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 UBE2HP62256 183 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 YWHAHQ04917 246 aaPredicted RBP17.21■□□□□ 0.35
LIME1-209ENST00000494776 RAB33AQ14088 237 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 CBX2Q14781 532 aaPredicted RBP17.21■□□□□ 0.35
LIME1-209ENST00000494776 SV2CQ496J9 727 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 LIN9Q5TKA1 542 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 LMBRD2Q68DH5 695 aaPredicted RBP17.21■□□□□ 0.35
LIME1-209ENST00000494776 ADHFE1Q8IWW8 467 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 SUSD6Q92537 303 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 ERCC4Q92889 916 aaPredicted RBP17.21■□□□□ 0.35
LIME1-209ENST00000494776 CCDC127Q96BQ5 260 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 SENP8Q96LD8 212 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 NECTIN4Q96NY8 510 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 IPO9Q96P70 1041 aaKnown RBP17.21■□□□□ 0.35
LIME1-209ENST00000494776 GSDMAQ96QA5 445 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 MTMR12Q9C0I1 747 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 KCTD10Q9H3F6 313 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 ITGA11Q9UKX5 1188 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 AGAP1Q9UPQ3 857 aa17.21■□□□□ 0.35
LIME1-209ENST00000494776 SPTBN5Q9NRC6 3674 aaKnown RBP17.21■□□□□ 0.35
LIME1-209ENST00000494776 CCDC195A0A1B0GUA6 201 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 NR3C1P04150 777 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 PNPLA4P41247 253 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 AARSP49588 968 aaKnown RBP eCLIP17.2■□□□□ 0.34
LIME1-209ENST00000494776 RBP5P82980 135 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 CYP24A1Q07973 514 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 DUOXA2Q1HG44 320 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 LILRA6Q6PI73 481 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 RSPO2Q6UXX9 243 aaPredicted RBP17.2■□□□□ 0.34
LIME1-209ENST00000494776 WDR49Q8IV35 697 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 GUF1Q8N442 669 aaKnown RBP17.2■□□□□ 0.34
LIME1-209ENST00000494776 C1orf127Q8N9H9 656 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 PHF7Q9BWX1 381 aaPredicted RBP17.2■□□□□ 0.34
LIME1-209ENST00000494776 PIDD1Q9HB75 910 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 INTS13Q9NVM9 706 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 PCDHA5Q9Y5H7 936 aa17.2■□□□□ 0.34
LIME1-209ENST00000494776 ANK1P16157 1881 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 CYB561D2O14569 222 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 SPTLC1O15269 473 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 RFPL2O75678 378 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 ELF1P32519 619 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 ZP2Q05996 745 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 BFSP1Q12934 665 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 MRPL58Q14197 206 aaKnown RBP17.19■□□□□ 0.34
LIME1-209ENST00000494776 PSMD6Q15008 389 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 CEP135Q66GS9 1140 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 OVOS1Q6IE37 1185 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 GPR149Q86SP6 731 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 METTL23Q86XA0 190 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 SLC9A9Q8IVB4 645 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 ELOA2Q8IYF1 753 aaPredicted RBP17.19■□□□□ 0.34
LIME1-209ENST00000494776 SMYD4Q8IYR2 804 aaPredicted RBP17.19■□□□□ 0.34
LIME1-209ENST00000494776 GJD3Q8N144 294 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 RPGRIP1Q96KN7 1286 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 GTPBP4Q9BZE4 634 aaKnown RBP17.19■□□□□ 0.34
LIME1-209ENST00000494776 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 ZDHHC7Q9NXF8 308 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 CDH22Q9UJ99 828 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 FBXL5Q9UKA1 691 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 FBXW11Q9UKB1 542 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 DSEQ9UL01 958 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 FRMD4BQ9Y2L6 1034 aa17.19■□□□□ 0.34
LIME1-209ENST00000494776 VWA8A3KMH1 1905 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 KPNA7A9QM74 516 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 C8AP07357 584 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 CPB1P15086 417 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 TYMPP19971 482 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 RPL13P26373 211 aaKnown RBP17.18■□□□□ 0.34
LIME1-209ENST00000494776 ROR1Q01973 937 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 MYO1EQ12965 1108 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 PPM1LQ5SGD2 360 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 ZNF658Q5TYW1 1059 aaPredicted RBP17.18■□□□□ 0.34
LIME1-209ENST00000494776 SLC8B1Q6J4K2 584 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 C15orf39Q6ZRI6 1047 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 CCDC149Q6ZUS6 474 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 CMASQ8NFW8 434 aaPredicted RBP17.18■□□□□ 0.34
LIME1-209ENST00000494776 OR5B17Q8NGF7 314 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 ZNF461Q8TAF7 563 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 FAM84AQ96KN4 292 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 MFSD14AQ96MC6 490 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 CGRRF1Q99675 332 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 OXCT2Q9BYC2 517 aaPredicted RBP17.18■□□□□ 0.34
LIME1-209ENST00000494776 DMAC2Q9NW81 257 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 TRAF3IP3Q9Y228 551 aa17.18■□□□□ 0.34
LIME1-209ENST00000494776 PRRG1O14668 218 aa17.17■□□□□ 0.34
LIME1-209ENST00000494776 TBC1D4O60343 1298 aa17.17■□□□□ 0.34
LIME1-209ENST00000494776 ZMYND10O75800 440 aa17.17■□□□□ 0.34
LIME1-209ENST00000494776 OAZ2O95190 189 aa17.17■□□□□ 0.34
LIME1-209ENST00000494776 SP100P23497 879 aaPredicted RBP17.17■□□□□ 0.34
LIME1-209ENST00000494776 NR2F2P24468 414 aa17.17■□□□□ 0.34
LIME1-209ENST00000494776 PLXNA3P51805 1871 aa17.17■□□□□ 0.34
LIME1-209ENST00000494776 MYBPC2Q14324 1141 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms