RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 POLIQ9UNA4 740 aa15.13■□□□□ 0.01
UBE3C-207ENST00000494532 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 TAF6P49848 677 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 CLCNKBP51801 687 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 JAM2P57087 298 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 DSC1Q08554 894 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 DRAP1Q14919 205 aaPredicted RBP15.12■□□□□ 0.01
UBE3C-207ENST00000494532 WDR72Q3MJ13 1102 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 PAN2Q504Q3 1202 aaKnown RBP15.12■□□□□ 0.01
UBE3C-207ENST00000494532 SFMBT2Q5VUG0 894 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 LRRC43Q8N309 656 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 PANX2Q96RD6 677 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 DNAJC7Q99615 494 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.014e-9■■■■□ 25.6
UBE3C-207ENST00000494532 NUCKS1Q9H1E3 243 aaKnown RBP15.12■□□□□ 0.01
UBE3C-207ENST00000494532 ABHD10Q9NUJ1 306 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 MYO6Q9UM54 1294 aa15.12■□□□□ 0.01
UBE3C-207ENST00000494532 PTPRSQ13332 1948 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 F8VZ95 297 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 DGKIO75912 1065 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 SOX5P35711 763 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 STAT1P42224 750 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 YWHAEP62258 255 aaKnown RBP15.11■□□□□ 0.01
UBE3C-207ENST00000494532 ASIC2Q16515 512 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 UPP1Q16831 310 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 FAM117BQ6P1L5 589 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 ZNF280BQ86YH2 543 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 HERVK_113Q902F9 699 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 FAXDC2Q96IV6 333 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 ARID3AQ99856 593 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 MTIF3Q9H2K0 278 aaKnown RBP15.11■□□□□ 0.01
UBE3C-207ENST00000494532 ZNHIT6Q9NWK9 470 aaKnown RBP15.11■□□□□ 0.01
UBE3C-207ENST00000494532 SNX9Q9Y5X1 595 aa15.11■□□□□ 0.01
UBE3C-207ENST00000494532 KPNA7A9QM74 516 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 B4GALT3O60512 393 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 GFPT2O94808 682 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 DDHD2O94830 711 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 PNMA6AP0CW24 399 aaPredicted RBP15.1■□□□□ 0.01
UBE3C-207ENST00000494532 KRT5P13647 590 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 USP8P40818 1118 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 ASPAP45381 313 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 TMCO2Q7Z6W1 182 aaPredicted RBP15.1■□□□□ 0.01
UBE3C-207ENST00000494532 GPIHBP1Q8IV16 184 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 FMNL3Q8IVF7 1028 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 COLGALT2Q8IYK4 626 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 SHC3Q92529 594 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 RABGGTAQ92696 567 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 SYN2Q92777 582 aaPredicted RBP15.1■□□□□ 0.01
UBE3C-207ENST00000494532 JAKMIP2Q96AA8 810 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 MMS19Q96T76 1030 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 PAAF1Q9BRP4 392 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 BCO2Q9BYV7 579 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 GPR88Q9GZN0 384 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 SMYD3Q9H7B4 428 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 NRDE2Q9H7Z3 1164 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 CYP3A43Q9HB55 503 aa15.1■□□□□ 0.01
UBE3C-207ENST00000494532 SPTLC1O15269 473 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 NRDCO43847 1150 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 WEE2P0C1S8 567 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 FERP16591 822 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 CD58P19256 250 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 RAP1GAPP47736 663 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 OR1G1P47890 313 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 LILRA4P59901 499 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 ARID5AQ03989 594 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 E4F1Q66K89 784 aaPredicted RBP15.09■□□□□ 0.01
UBE3C-207ENST00000494532 DCLRE1AQ6PJP8 1040 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 LRRC8AQ8IWT6 810 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 CMTR2Q8IYT2 770 aaKnown RBP15.09■□□□□ 0.01
UBE3C-207ENST00000494532 C3orf58Q8NDZ4 430 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 CCDC112Q8NEF3 446 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 TMEM175Q9BSA9 504 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 GDAP2Q9NXN4 497 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 CXXC1Q9P0U4 656 aaPredicted RBP15.09■□□□□ 0.01
UBE3C-207ENST00000494532 DNAJB4Q9UDY4 337 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 PCDHB4Q9Y5E5 795 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 SLC4A7Q9Y6M7 1214 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 COL4A6Q14031 1691 aa15.09■□□□□ 0.01
UBE3C-207ENST00000494532 FOXN3O00409 490 aaPredicted RBP15.08■□□□□ 0
UBE3C-207ENST00000494532 B3GAT3O94766 335 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 KIF4AO95239 1232 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 CCDC172P0C7W6 258 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 ACO1P21399 889 aaKnown RBP15.08■□□□□ 0
UBE3C-207ENST00000494532 PAX3P23760 479 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 HNRNPH3P31942 346 aaKnown RBP15.08■□□□□ 0
UBE3C-207ENST00000494532 MAGEA10P43363 369 aaPredicted RBP15.08■□□□□ 0
UBE3C-207ENST00000494532 DSTYKQ6XUX3 929 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 UBR7Q8N806 425 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 ZNF689Q96CS4 500 aaPredicted RBP15.08■□□□□ 0
UBE3C-207ENST00000494532 TRIM44Q96DX7 344 aaPredicted RBP15.08■□□□□ 0
UBE3C-207ENST00000494532 SLC9A7Q96T83 725 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 YME1L1Q96TA2 773 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 BAG1Q99933 345 aaPredicted RBP15.08■□□□□ 0
UBE3C-207ENST00000494532 SDCBP2Q9H190 292 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 RC3H2Q9HBD1 1191 aaKnown RBP15.08■□□□□ 0
UBE3C-207ENST00000494532 CISHQ9NSE2 258 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 AIPL1Q9NZN9 384 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 HCSTQ9UBK5 93 aa15.08■□□□□ 0
UBE3C-207ENST00000494532 PRG3Q9Y2Y8 225 aaPredicted RBP15.08■□□□□ 0
UBE3C-207ENST00000494532 TMEM189-UBE2V1I3L0A0 370 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms