RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 BCO2Q9BYV7 579 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 OGFRQ9NZT2 677 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 TTC7AQ9ULT0 858 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-225ENST00000494465 L1RE1Q9UN81 338 aa17.65■□□□□ 0.42
ATG4B-225ENST00000494465 PGRMC1O00264 195 aaKnown RBP17.64■□□□□ 0.41
ATG4B-225ENST00000494465 DUSP11O75319 330 aaKnown RBP17.64■□□□□ 0.41
ATG4B-225ENST00000494465 ERLIN1O75477 346 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 COMTP21964 271 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 RRM1P23921 792 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 DCAF4L1Q3SXM0 396 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 C2CD6Q53TS8 623 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 LLGL2Q6P1M3 1020 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 TMEM40Q8WWA1 233 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 KRT35Q92764 455 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 CARD9Q9H257 536 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 CXCL16Q9H2A7 254 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 VRTNQ9H8Y1 702 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 DNAH12Q6ZR08 3092 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 SCN10AQ9Y5Y9 1956 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 TMEM88BA6NKF7 163 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 TMEM110-MUSTN1A8MSY1 372 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 MYBL1P10243 752 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 MYBL2P10244 700 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 NSFP46459 744 aaKnown RBP17.64■□□□□ 0.41
ATG4B-225ENST00000494465 MARCKSL1P49006 195 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 LACTBP83111 547 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-225ENST00000494465 CAP1Q01518 475 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 SLC7A5Q01650 507 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 PTP4A2Q12974 167 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 TMEM132DQ14C87 1099 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 GLE1Q53GS7 698 aaKnown RBP17.64■□□□□ 0.41
ATG4B-225ENST00000494465 CYP4F22Q6NT55 531 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 CATSPER4Q7RTX7 472 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 PHF13Q86YI8 300 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-225ENST00000494465 HINFPQ9BQA5 517 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 KATNAL1Q9BW62 490 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 EIF2AQ9BY44 585 aaKnown RBP17.64■□□□□ 0.41
ATG4B-225ENST00000494465 SDCBP2Q9H190 292 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 NXF1Q9UBU9 619 aaKnown RBP17.64■□□□□ 0.41
ATG4B-225ENST00000494465 C2CD2Q9Y426 696 aa17.64■□□□□ 0.41
ATG4B-225ENST00000494465 NPTXRO95502 500 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 EIF4BP23588 611 aaKnown RBP17.63■□□□□ 0.41
ATG4B-225ENST00000494465 MCM3P25205 808 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 PEX5P50542 639 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 GUCY2FP51841 1108 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 FCGRTP55899 365 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 ZNF394Q53GI3 561 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 CCDC70Q6NSX1 233 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 C8orf74Q6P047 294 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 CCNI2Q6ZMN8 369 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-225ENST00000494465 RUBCNQ92622 972 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 FAXDC2Q96IV6 333 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 TRIM7Q9C029 511 aa17.63■□□□□ 0.41
ATG4B-225ENST00000494465 PDCD11Q14690 1871 aaKnown RBP17.63■□□□□ 0.41
ATG4B-225ENST00000494465 MIF4GDA9UHW6 222 aaKnown RBP17.62■□□□□ 0.41
ATG4B-225ENST00000494465 MAP2K7O14733 419 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 BRD2P25440 801 aaKnown RBP17.62■□□□□ 0.41
ATG4B-225ENST00000494465 RAP1GAPP47736 663 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 PCBP1Q15365 356 aaKnown RBP eCLIP17.62■□□□□ 0.412e-7■■□□□ 14.5
ATG4B-225ENST00000494465 WDR72Q3MJ13 1102 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 ZNF667Q5HYK9 610 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 SLC27A1Q6PCB7 646 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 SMC1BQ8NDV3 1235 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 TFAP2BQ92481 460 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 TRIM11Q96F44 468 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 KRT12Q99456 494 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 FLT3LGP49771 235 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 GJA9P57773 515 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 SNX17Q15036 470 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 VCPIP1Q96JH7 1222 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 C11orf70Q9BRQ4 267 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 AP1M1Q9BXS5 423 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 STIM2Q9P246 746 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 CASP8AP2Q9UKL3 1982 aa17.62■□□□□ 0.41
ATG4B-225ENST00000494465 C17orf102A2RUQ5 167 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 C6orf222P0C671 652 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-225ENST00000494465 POLR2BP30876 1174 aaKnown RBP17.61■□□□□ 0.41
ATG4B-225ENST00000494465 ATICP31939 592 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 SCN1AP35498 2009 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 PLA2G4AP47712 749 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 CDH8P55286 799 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 NOTUMQ6P988 496 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 PHLDB2Q86SQ0 1253 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 NT5DC4Q86YG4 428 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 RNPC3Q96LT9 517 aaKnown RBP17.61■□□□□ 0.41
ATG4B-225ENST00000494465 GPBP1L1Q9HC44 474 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-225ENST00000494465 SNTG2Q9NY99 539 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 GLI1P08151 1106 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 ITGA4P13612 1032 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 ZNF211Q13398 564 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-225ENST00000494465 CD302Q8IX05 232 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 GSPT2Q8IYD1 628 aaKnown RBP17.61■□□□□ 0.41
ATG4B-225ENST00000494465 WHAMMQ8TF30 809 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 ZMAT2Q96NC0 199 aaKnown RBP17.61■□□□□ 0.41
ATG4B-225ENST00000494465 WNT8AQ9H1J5 351 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 SMYD3Q9H7B4 428 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 DPP3Q9NY33 737 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 ADAM22Q9P0K1 906 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 ANAPC7Q9UJX3 599 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms