RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CD4P01730 458 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ALAS1P13196 640 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 PRKCAP17252 672 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 MCCP23508 829 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ARL4AP40617 200 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 TDO2P48775 406 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ERVFC1P60507 584 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 PSMC6P62333 389 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 MRPS5P82675 430 aaKnown RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 TFAP4Q01664 338 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 IKQ13123 557 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ITGA7Q13683 1181 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 PCBP1Q15365 356 aaKnown RBP eCLIP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 C20orf194Q5TEA3 1177 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 CCDC174Q6PII3 467 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 KCTD1Q719H9 257 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 CHST13Q8NET6 341 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ABHD4Q8TB40 342 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ATXN2LQ8WWM7 1075 aaKnown RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 HERVK_113Q902F9 699 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 TRMT2BQ96GJ1 504 aaKnown RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 LIN37Q96GY3 246 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 TMEM169Q96HH4 297 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 FAM84AQ96KN4 292 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 SEC62Q99442 399 aaKnown RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 PLCD4Q9BRC7 762 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 LRRCC1Q9C099 1032 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 KATNBL1Q9H079 304 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 AP5M1Q9H0R1 490 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 UPF3AQ9H1J1 476 aaKnown RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 HIPK3Q9H422 1215 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 CERS4Q9HA82 394 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 IL23AQ9NPF7 189 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 CRTAC1Q9NQ79 661 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ECHDC1Q9NTX5 307 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 MARCH2Q9P0N8 246 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ARPP21Q9UBL0 812 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 FBXO40Q9UH90 709 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 DDX19BQ9UMR2 479 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 YBX2Q9Y2T7 364 aaKnown RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 PCDHA9Q9Y5H5 950 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 PCDHA8Q9Y5H6 950 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 MYH4Q9Y623 1939 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ZNF536O15090 1300 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-219ENST00000494323 FAM47E-STBD1D6RA91 191 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 WNT9AO14904 365 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 GPAA1O43292 621 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 MARCH6O60337 910 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 B4GALT4O60513 344 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 NMT2O60551 498 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 NPTXRO95502 500 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 TSPY3P0CV98 308 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 TSPY8P0CW00 308 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 PNLIPP16233 465 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 GRK2P25098 689 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 TRHRP34981 398 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-219ENST00000494323 GRK3P35626 688 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 IGFALSP35858 605 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 FLT3P36888 993 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 SLC1A4P43007 532 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 CYP4F8P98187 520 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 NFKB2Q00653 900 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 TFF2Q03403 129 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 MVKQ03426 396 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 FSCN1Q16658 493 aaKnown RBP6.06□□□□□ -1.44
PTCD3-219ENST00000494323 TIGD5Q53EQ6 642 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 MUM1L1Q5H9M0 696 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 AKNAD1Q5T1N1 836 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 TAPT1Q6NXT6 567 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 ABHD17CQ6PCB6 329 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 PSRC1Q6PGN9 363 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-219ENST00000494323 CEP68Q76N32 757 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 DEFB128Q7Z7B8 93 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 TLK2Q86UE8 772 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 FAM133AQ8N9E0 248 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 KBTBD3Q8NAB2 608 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 USP33Q8TEY7 942 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 MTA3Q9BTC8 594 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 ACAD9Q9H845 621 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 EPB41L4AQ9HCS5 686 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-219ENST00000494323 A1CFQ9NQ94 594 aaKnown RBP6.06□□□□□ -1.44
PTCD3-219ENST00000494323 RNF146Q9NTX7 359 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 TRMT13Q9NUP7 481 aaKnown RBP6.06□□□□□ -1.44
PTCD3-219ENST00000494323 CLDND1Q9NY35 253 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 COA3Q9Y2R0 106 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-219ENST00000494323 RWDD3Q9Y3V2 267 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 SLC4A7Q9Y6M7 1214 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 X6R8D5 127 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 ROBO3Q96MS0 1386 aa6.06□□□□□ -1.44
PTCD3-219ENST00000494323 MYH7P12883 1935 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 CHD9Q3L8U1 2897 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 GBF1Q92538 1859 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 ASB14A6NK59 587 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 DBX1A6NMT0 343 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 C22orf46C9J442 243 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 GSTA4O15217 222 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 OPA1O60313 960 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 PPP1R11O60927 126 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-219ENST00000494323 CABYRO75952 493 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms