RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 LILRA4P59901 499 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 NTHL1P78549 312 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 NUCB2P80303 420 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 MRPL58Q14197 206 aaKnown RBP15.91■□□□□ 0.14
ATG4B-224ENST00000494132 KMT5BQ4FZB7 885 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 RDH13Q8NBN7 331 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 KIAA0895Q8NCT3 520 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 APPL2Q8NEU8 664 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 ST13P5Q8NFI4 369 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-224ENST00000494132 C1QTNF1Q9BXJ1 281 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 SMOC2Q9H3U7 446 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 EXOC1Q9NV70 894 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 ZDHHC7Q9NXF8 308 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 HSPBP1Q9NZL4 362 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 RAPGEFL1Q9UHV5 662 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 DERAQ9Y315 318 aa15.91■□□□□ 0.14
ATG4B-224ENST00000494132 FAM237AA0A1B0GTK4 181 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 PVALEFA0A1B0GWK0 134 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 ANO9A1A5B4 782 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 H7C4K7 107 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 TBC1D4O60343 1298 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 CPB1P15086 417 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 YWHAHQ04917 246 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-224ENST00000494132 STK4Q13043 487 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 TMEM31Q5JXX7 168 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 SLC8B1Q6J4K2 584 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 GET4Q7L5D6 327 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-224ENST00000494132 GRASPQ7Z6J2 395 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-224ENST00000494132 SENP8Q96LD8 212 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 TSPAN18Q96SJ8 248 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 LRFN3Q9BTN0 628 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 WDR6Q9NNW5 1121 aaKnown RBP15.9■□□□□ 0.14
ATG4B-224ENST00000494132 AGPAT3Q9NRZ7 376 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 HCFC1R1Q9NWW0 138 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 LIMD1Q9UGP4 676 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 UBE4BO95155 1302 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 PTPRJQ12913 1337 aa15.9■□□□□ 0.14
ATG4B-224ENST00000494132 A0A1W2PQ27 194 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 A0A1W2PQ64 194 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 A0A1W2PQD8 194 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 SEC24AO95486 1093 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 ITGB3P05106 788 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 POLR2BP30876 1174 aaKnown RBP15.89■□□□□ 0.13
ATG4B-224ENST00000494132 TAF6P49848 677 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 KRBA2Q6ZNG9 492 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 USP37Q86T82 979 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 ZNF461Q8TAF7 563 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 PGLYRP2Q96PD5 576 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 MYADMQ96S97 322 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 TMEM209Q96SK2 561 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 MTMR12Q9C0I1 747 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 CYP4F11Q9HBI6 524 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 USP25Q9UHP3 1055 aa15.89■□□□□ 0.13
ATG4B-224ENST00000494132 PRRG1O14668 218 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 ABLIM3O94929 683 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 ZNF202O95125 648 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 C1RP00736 705 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 KRT19P08727 400 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 TMEM191BP0C7N4 346 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 ADCY1Q08828 1119 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 PTPN21Q16825 1174 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 OVOS1Q6IE37 1185 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 RNF19BQ6ZMZ0 732 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 OTOP3Q7RTS5 596 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 C1orf127Q8N9H9 656 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 OR5B17Q8NGF7 314 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 ACSF2Q96CM8 615 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-224ENST00000494132 AGAP1Q9UPQ3 857 aa15.88■□□□□ 0.13
ATG4B-224ENST00000494132 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-224ENST00000494132 ZNF233A6NK53 670 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 GPR37L1O60883 481 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 OAZ2O95190 189 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 VNN2O95498 520 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 RPN1P04843 607 aaKnown RBP15.87■□□□□ 0.13
ATG4B-224ENST00000494132 HNRNPA1P09651 372 aaKnown RBP eCLIP15.87■□□□□ 0.13
ATG4B-224ENST00000494132 ODC1P11926 461 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 ELF1P32519 619 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 ZXDAP98168 799 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 POU5F1Q01860 360 aaKnown RBP15.87■□□□□ 0.13
ATG4B-224ENST00000494132 BFSP1Q12934 665 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 SNRNP35Q16560 246 aaKnown RBP15.87■□□□□ 0.13
ATG4B-224ENST00000494132 KNOP1Q1ED39 458 aaKnown RBP15.87■□□□□ 0.13
ATG4B-224ENST00000494132 BMT2Q1RMZ1 405 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 HS2ST1Q7LGA3 356 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 NT5DC4Q86YG4 428 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 EDAQ92838 391 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 DNMT3BQ9UBC3 853 aaKnown RBP15.87■□□□□ 0.13
ATG4B-224ENST00000494132 USTQ9Y2C2 406 aa15.87■□□□□ 0.13
ATG4B-224ENST00000494132 GOLGA6L4A6NEF3 574 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 CYB561D2O14569 222 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 KIAA0391O15091 583 aaKnown RBP15.86■□□□□ 0.13
ATG4B-224ENST00000494132 XYLBO75191 536 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 PAPLNO95428 1278 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 LRG1P02750 347 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 DLATP10515 647 aaKnown RBP15.86■□□□□ 0.13
ATG4B-224ENST00000494132 ATF2P15336 505 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 TYMPP19971 482 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 COL9A1P20849 921 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 DPYDQ12882 1025 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms