RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 LILRA4P59901 499 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 RBP5P82980 135 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 CREMQ03060 361 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 KLHL40Q2TBA0 621 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 CCDC40Q4G0X9 1142 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 DCAF17Q5H9S7 520 aaPredicted RBP10.9□□□□□ -0.66
RFC2-211ENST00000494019 KIAA0319Q5VV43 1072 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 SCARA3Q6AZY7 606 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 LLGL2Q6P1M3 1020 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 PDXDC1Q6P996 788 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 SASS6Q6UVJ0 657 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 TRAPPC11Q7Z392 1133 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 LRRC52Q8N7C0 313 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 PIK3R5Q8WYR1 880 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 ZNF516Q92618 1163 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 CEP63Q96MT8 703 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 CDCA3Q99618 268 aaPredicted RBP10.9□□□□□ -0.66
RFC2-211ENST00000494019 DUSP9Q99956 384 aaKnown RBP10.9□□□□□ -0.66
RFC2-211ENST00000494019 MMRN2Q9H8L6 949 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.9□□□□□ -0.66
RFC2-211ENST00000494019 CLDND1Q9NY35 253 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 RWDD2AQ9UIY3 292 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 TIMM13Q9Y5L4 95 aaPredicted RBP10.9□□□□□ -0.66
RFC2-211ENST00000494019 COL6A3P12111 3177 aa10.9□□□□□ -0.66
RFC2-211ENST00000494019 TCF20Q9UGU0 1960 aaKnown RBP10.89□□□□□ -0.67
RFC2-211ENST00000494019 KPNA7A9QM74 516 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 TEX28O15482 410 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 LINC01565O15544 149 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 LILRB3O75022 631 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 CLASP2O75122 1294 aaKnown RBP10.89□□□□□ -0.67
RFC2-211ENST00000494019 SRGAP2BP0DMP2 458 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 PAX3P23760 479 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 KLRC2P26717 231 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 PIK3CAP42336 1068 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 NDUFV1P49821 464 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 AP3M2P53677 418 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 CLDN10P78369 228 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 RBM10P98175 930 aaKnown RBP10.89□□□□□ -0.67
RFC2-211ENST00000494019 YWHAHQ04917 246 aaPredicted RBP10.89□□□□□ -0.67
RFC2-211ENST00000494019 MYO1EQ12965 1108 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 TRPC3Q13507 836 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 STX1AQ16623 288 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
RFC2-211ENST00000494019 TCERG1LQ5VWI1 586 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 TDRD10Q5VZ19 366 aaKnown RBP10.89□□□□□ -0.67
RFC2-211ENST00000494019 ZNF280DQ6N043 979 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 FOXR2Q6PJQ5 311 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 ANKS3Q6ZW76 656 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 GPR65Q8IYL9 337 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 EFHBQ8N7U6 833 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 APPL2Q8NEU8 664 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 LNX1Q8TBB1 728 aaPredicted RBP10.89□□□□□ -0.67
RFC2-211ENST00000494019 PABPC5Q96DU9 382 aaKnown RBP10.89□□□□□ -0.67
RFC2-211ENST00000494019 SENP8Q96LD8 212 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 KLHL5Q96PQ7 755 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 PRDM6Q9NQX0 595 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 ARMCX3Q9UH62 379 aaPredicted RBP10.89□□□□□ -0.67
RFC2-211ENST00000494019 HCFC2Q9Y5Z7 792 aa10.89□□□□□ -0.67
RFC2-211ENST00000494019 ARHGEF37A1IGU5 675 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 H7C4K7 107 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 CYB561D2O14569 222 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 IKBKBO14920 756 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 NCK2O43639 380 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 TBX10O75333 385 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 GLP2RO95838 553 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 EPCAMP16422 314 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 GCLMP48507 274 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 ENPEPQ07075 957 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 TPD52L1Q16890 204 aaPredicted RBP10.88□□□□□ -0.67
RFC2-211ENST00000494019 CTXN3Q4LDR2 81 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 C1orf220Q5T0J3 134 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 FILIP1Q7Z7B0 1213 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 PPFIBP1Q86W92 1011 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 VN1R2Q8NFZ6 395 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 HLA-CQ95604 372 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 BORCS6Q96GS4 357 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 HPDLQ96IR7 371 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 SRRTQ9BXP5 876 aaKnown RBP10.88□□□□□ -0.67
RFC2-211ENST00000494019 UBE2ZQ9H832 354 aaPredicted RBP10.88□□□□□ -0.67
RFC2-211ENST00000494019 RXFP1Q9HBX9 757 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 METTL14Q9HCE5 456 aaKnown RBP10.88□□□□□ -0.67
RFC2-211ENST00000494019 FNIP2Q9P278 1114 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 THEGQ9P2T0 379 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 MTRRQ9UBK8 725 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 BARX2Q9UMQ3 279 aaPredicted RBP10.88□□□□□ -0.67
RFC2-211ENST00000494019 SNX9Q9Y5X1 595 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 CDY1Q9Y6F8 540 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 PRUNE2Q8WUY3 3088 aa10.88□□□□□ -0.67
RFC2-211ENST00000494019 BRWD1Q9NSI6 2320 aa10.87□□□□□ -0.67
RFC2-211ENST00000494019 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
RFC2-211ENST00000494019 STX10O60499 249 aa10.87□□□□□ -0.67
RFC2-211ENST00000494019 HUS1O60921 280 aa10.87□□□□□ -0.67
RFC2-211ENST00000494019 FGFR1OPO95684 399 aaKnown RBP10.87□□□□□ -0.67
RFC2-211ENST00000494019 GLUD1P00367 558 aa10.87□□□□□ -0.67
RFC2-211ENST00000494019 CST3P01034 146 aaPredicted RBP10.87□□□□□ -0.67
RFC2-211ENST00000494019 C4BPAP04003 597 aaKnown RBP10.87□□□□□ -0.67
RFC2-211ENST00000494019 CCDC192P0DO97 292 aa10.87□□□□□ -0.67
RFC2-211ENST00000494019 CPB1P15086 417 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms