RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 TUBGCP2Q9BSJ2 902 aa13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 PI4K2AQ9BTU6 479 aa13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 ZBP1Q9H171 429 aa13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 APOBEC3GQ9HC16 384 aaKnown RBP13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 TAB2Q9NYJ8 693 aa13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 MAGEC2Q9UBF1 373 aaPredicted RBP13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 LZTS1Q9Y250 596 aa13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 COQ4Q9Y3A0 265 aa13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 NUB1Q9Y5A7 615 aa13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 SF3B1O75533 1304 aaKnown RBP eCLIP13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
RHBDF1-211ENST00000493647 CHD7Q9P2D1 2997 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 SMTNL1A8MU46 457 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 KPNA7A9QM74 516 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 M0QZQ0 153 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 PMM2O15305 246 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 STAU1O95793 577 aaKnown RBP13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 CAVIN2O95810 425 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 SOD2P04179 222 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 FGFR3P22607 806 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 PIK3CAP42336 1068 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 MYL7Q01449 175 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 KRT17Q04695 432 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 UBE3AQ05086 875 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 TRPC3Q13507 836 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 MAN2A1Q16706 1144 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 FAM171A1Q5VUB5 890 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 ZNF560Q96MR9 790 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 CHST7Q9NS84 486 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 LIMA1Q9UHB6 759 aaKnown RBP13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 TIMM13Q9Y5L4 95 aaPredicted RBP13.03□□□□□ -0.32
RHBDF1-211ENST00000493647 COL4A4P53420 1690 aaPredicted RBP13.02□□□□□ -0.32
RHBDF1-211ENST00000493647 SCN1AP35498 2009 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 BECN2A8MW95 431 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 LILRB3O75022 631 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 ASS1P00966 412 aaKnown RBP13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 PNPLA4P41247 253 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 COPB1P53618 953 aaKnown RBP13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 PTPN14Q15678 1187 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 ZNF699Q32M78 642 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 SV2CQ496J9 727 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 VWA3BQ502W6 1294 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 KIAA0319Q5VV43 1072 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 DSTYKQ6XUX3 929 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 LIMS2Q7Z4I7 341 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 RNF214Q8ND24 703 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 FBXL13Q8NEE6 735 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 GUCD1Q96NT3 240 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 NDST4Q9H3R1 872 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 VRTNQ9H8Y1 702 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 TLR9Q9NR96 1032 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 RAB20Q9NX57 234 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 GDAP2Q9NXN4 497 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 L1RE1Q9UN81 338 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 PLXNA4Q9HCM2 1894 aa13.02□□□□□ -0.33
RHBDF1-211ENST00000493647 LRRC10BA6NIK2 292 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 HIDE1A8MVS5 230 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 CYB561D2O14569 222 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 P4HA2O15460 535 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 TRAPPC3O43617 180 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 N4BP1O75113 896 aaKnown RBP13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 CTSAP10619 480 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 ATICP31939 592 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 GLUD2P49448 558 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 DSG1Q02413 1049 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 ELAVL2Q12926 359 aaKnown RBP13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 MYO1EQ12965 1108 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 MRPL58Q14197 206 aaKnown RBP13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 SOWAHAQ2M3V2 549 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 SGSM1Q2NKQ1 1148 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 USP41Q3LFD5 358 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 PLPP4Q5VZY2 271 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 WSCD1Q658N2 575 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 PRSS55Q6UWB4 352 aaPredicted RBP13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 OSTM1Q86WC4 334 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 CEP57Q86XR8 500 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 LNX1Q8TBB1 728 aaPredicted RBP13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 RIN2Q8WYP3 895 aaPredicted RBP13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 TCF25Q9BQ70 676 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 TTPALQ9BTX7 342 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 LMAN2LQ9H0V9 348 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 SDCBP2Q9H190 292 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 VPS16Q9H269 839 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 SMYD3Q9H7B4 428 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 PUF60Q9UHX1 559 aaKnown RBP13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 SNX9Q9Y5X1 595 aa13.01□□□□□ -0.33
RHBDF1-211ENST00000493647 C2orf71A6NGG8 1288 aa13□□□□□ -0.33
RHBDF1-211ENST00000493647 C2CD2LO14523 706 aa13□□□□□ -0.33
RHBDF1-211ENST00000493647 SYN3O14994 580 aa13□□□□□ -0.33
RHBDF1-211ENST00000493647 ADAM12O43184 909 aa13□□□□□ -0.33
RHBDF1-211ENST00000493647 HCRTO43612 131 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms