RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FOSBP53539 338 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 DMP1Q13316 513 aaPredicted RBP19.31■□□□□ 0.68
NUP50-218ENST00000493456 MPZL3Q6UWV2 235 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 RNF19BQ6ZMZ0 732 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 SHKBP1Q8TBC3 707 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 C18orf25Q96B23 403 aaPredicted RBP19.31■□□□□ 0.68
NUP50-218ENST00000493456 TBC1D32Q96NH3 1257 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 POLD4Q9HCU8 107 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 ARHGAP28Q9P2N2 729 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 YIPF1Q9Y548 306 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 MYBPHLA2RUH7 354 aa19.3■□□□□ 0.68
NUP50-218ENST00000493456 MARCKSP29966 332 aaPredicted RBP19.3■□□□□ 0.68
NUP50-218ENST00000493456 HOXA6P31267 233 aa19.3■□□□□ 0.68
NUP50-218ENST00000493456 PEX3P56589 373 aa19.3■□□□□ 0.68
NUP50-218ENST00000493456 DMWDQ09019 674 aa19.3■□□□□ 0.68
NUP50-218ENST00000493456 RALGPS2Q86X27 583 aaPredicted RBP19.3■□□□□ 0.68
NUP50-218ENST00000493456 FAM200AQ8TCP9 573 aa19.3■□□□□ 0.68
NUP50-218ENST00000493456 TCHPQ9BT92 498 aa19.3■□□□□ 0.68
NUP50-218ENST00000493456 TARS2Q9BW92 718 aaKnown RBP19.3■□□□□ 0.68
NUP50-218ENST00000493456 RBM19Q9Y4C8 960 aaKnown RBP19.3■□□□□ 0.68
NUP50-218ENST00000493456 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.3■□□□□ 0.68
NUP50-218ENST00000493456 STK24Q9Y6E0 443 aa19.3■□□□□ 0.68
NUP50-218ENST00000493456 FRYQ5TBA9 3013 aa19.3■□□□□ 0.68
NUP50-218ENST00000493456 PDCD11Q14690 1871 aaKnown RBP19.3■□□□□ 0.68
NUP50-218ENST00000493456 CITO14578 2027 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 A0A1W2PRU2 124 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 SLC38A8A6NNN8 435 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 SPECC1L-ADORA2AF8WAN1 911 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 ABLIM1O14639 778 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 GDF9O60383 454 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 JAK2O60674 1132 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 LARGE1O95461 756 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 CTHP32929 405 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 FXR2P51116 673 aaKnown RBP eCLIP19.29■□□□□ 0.68
NUP50-218ENST00000493456 LIMK1P53667 647 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 YWHAHQ04917 246 aaPredicted RBP19.29■□□□□ 0.68
NUP50-218ENST00000493456 SRSF5Q13243 272 aaKnown RBP19.29■□□□□ 0.68
NUP50-218ENST00000493456 ECM1Q16610 540 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 IL31Q6EBC2 164 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 CEP68Q76N32 757 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 TAS1R3Q7RTX0 852 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 WDR5BQ86VZ2 330 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 TMC8Q8IU68 726 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 SYNPOQ8N3V7 929 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 RSPRY1Q96DX4 576 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 DRC1Q96MC2 740 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 KMT5AQ9NQR1 393 aa19.29■□□□□ 0.68
NUP50-218ENST00000493456 RBM12Q9NTZ6 932 aaKnown RBP19.29■□□□□ 0.68
NUP50-218ENST00000493456 M0QZQ0 153 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 OAZ2O95190 189 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 EPHB3P54753 998 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 ZNF174Q15697 407 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 ARHGAP29Q52LW3 1261 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 HEATR6Q6AI08 1181 aaKnown RBP19.28■□□□□ 0.68
NUP50-218ENST00000493456 Q6ZS52 159 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 HAUS6Q7Z4H7 955 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 FAM160A2Q8N612 972 aaPredicted RBP19.28■□□□□ 0.68
NUP50-218ENST00000493456 LRRC3Q9BY71 257 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 C17orf75Q9HAS0 396 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 DDX19AQ9NUU7 478 aaKnown RBP19.28■□□□□ 0.68
NUP50-218ENST00000493456 OBP2AQ9NY56 170 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 LRWD1Q9UFC0 647 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 ANGPTL2Q9UKU9 493 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 KIAA1024Q9UPX6 916 aa19.28■□□□□ 0.68
NUP50-218ENST00000493456 HIP1RO75146 1068 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 TOM1L1O75674 476 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 FGF19O95750 216 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 ALDH1A3P47895 512 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 SOX9P48436 509 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 NOLC1Q14978 699 aaKnown RBP eCLIP19.27■□□□□ 0.68
NUP50-218ENST00000493456 AASDHQ4L235 1098 aaPredicted RBP19.27■□□□□ 0.68
NUP50-218ENST00000493456 TXNDC11Q6PKC3 985 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 ARID3BQ8IVW6 561 aaPredicted RBP19.27■□□□□ 0.68
NUP50-218ENST00000493456 DAW1Q8N136 415 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 LOXL4Q96JB6 756 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 DNAJC25Q9H1X3 360 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 ASB3Q9Y575 518 aa19.27■□□□□ 0.68
NUP50-218ENST00000493456 RALGAPA1Q6GYQ0 2036 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 OR6C75A6NL08 312 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 DPYSL4O14531 572 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 MEFVO15553 781 aaPredicted RBP19.26■□□□□ 0.67
NUP50-218ENST00000493456 HARSP12081 509 aaKnown RBP19.26■□□□□ 0.67
NUP50-218ENST00000493456 KCNA4P22459 653 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 PLCB2Q00722 1185 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 STRN3Q13033 797 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 CCINQ13939 588 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 SLC10A6Q3KNW5 377 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 WDR44Q5JSH3 913 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 TTC38Q5R3I4 469 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 USP37Q86T82 979 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 RAB34Q9BZG1 259 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 FOXP1Q9H334 677 aaPredicted RBP19.26■□□□□ 0.67
NUP50-218ENST00000493456 TUBGCP4Q9UGJ1 667 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 DNM3Q9UQ16 869 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 CEP295Q9C0D2 2601 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 ASPMQ8IZT6 3477 aa19.26■□□□□ 0.67
NUP50-218ENST00000493456 NUP210Q8TEM1 1887 aaPredicted RBP19.25■□□□□ 0.67
NUP50-218ENST00000493456 VNN2O95498 520 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 PMLP29590 882 aa19.25■□□□□ 0.67
NUP50-218ENST00000493456 LRPAP1P30533 357 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms