RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 FNTBP49356 437 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 TOB1P50616 345 aaPredicted RBP14.96□□□□□ -0.01
SAMM50-204ENST00000493161 CCR3P51677 355 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 NRLP54845 237 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 RAD51AP2Q09MP3 1159 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 DMP1Q13316 513 aaPredicted RBP14.96□□□□□ -0.01
SAMM50-204ENST00000493161 LAIR1Q6GTX8 287 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 ZNF280DQ6N043 979 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 RINT1Q6NUQ1 792 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 Q6ZS52 159 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 C1orf186Q6ZWK4 172 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 TMC8Q8IU68 726 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 ELMOD1Q8N336 334 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 CELF5Q8N6W0 485 aaKnown RBP14.96□□□□□ -0.01
SAMM50-204ENST00000493161 IGSF22Q8N9C0 903 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 TTC8Q8TAM2 541 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 DEPDC1BQ8WUY9 529 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 LRRC3BQ96PB8 259 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 HAPLN2Q9GZV7 340 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 DNAJC25Q9H1X3 360 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 ASAH2Q9NR71 780 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 PCDHB8Q9UN66 801 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 YIPF1Q9Y548 306 aa14.96□□□□□ -0.01
SAMM50-204ENST00000493161 F5P12259 2224 aa14.96□□□□□ -0.02
SAMM50-204ENST00000493161 EPG5Q9HCE0 2579 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.95□□□□□ -0.02
SAMM50-204ENST00000493161 A0A1W2PRU2 124 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 SLC38A8A6NNN8 435 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 GDF9O60383 454 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 CXCL12P48061 93 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 PTGDRQ13258 359 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 PDIA5Q14554 519 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 TXNDC11Q6PKC3 985 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 APPL2Q8NEU8 664 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 BEST2Q8NFU1 509 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 ZFYVE19Q96K21 471 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 MMTAG2Q9BU76 263 aaKnown RBP14.95□□□□□ -0.02
SAMM50-204ENST00000493161 SLITRK6Q9H5Y7 841 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 ANKFY1Q9P2R3 1169 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 RAB23Q9ULC3 237 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 DNM3Q9UQ16 869 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 PCDHB6Q9Y5E3 794 aa14.95□□□□□ -0.02
SAMM50-204ENST00000493161 K7ESF4 209 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 M0QZQ0 153 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 SOAT2O75908 522 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 OAZ2O95190 189 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 RETP07949 1114 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 CXCL8P10145 99 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 GUCY2FP51841 1108 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 CDR1P51861 262 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 DUSP4Q13115 394 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 SIM2Q14190 667 aaPredicted RBP14.94□□□□□ -0.02
SAMM50-204ENST00000493161 HEATR6Q6AI08 1181 aaKnown RBP14.94□□□□□ -0.02
SAMM50-204ENST00000493161 SPEM1Q8N4L4 309 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 TTC9BQ8N6N2 239 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 FBXO18Q8NFZ0 1043 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 IER2Q9BTL4 223 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 MKNK1Q9BUB5 465 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 SEMA4GQ9NTN9 838 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 DAXXQ9UER7 740 aaPredicted RBP14.94□□□□□ -0.02
SAMM50-204ENST00000493161 MAFFQ9ULX9 164 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 SLC27A5Q9Y2P5 690 aa14.94□□□□□ -0.02
SAMM50-204ENST00000493161 RBM19Q9Y4C8 960 aaKnown RBP14.94□□□□□ -0.02
SAMM50-204ENST00000493161 PDCD11Q14690 1871 aaKnown RBP14.94□□□□□ -0.02
SAMM50-204ENST00000493161 CITO14578 2027 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 CACNA1BQ00975 2339 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 PPEF2O14830 753 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 SLC30A4O14863 429 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 TOM1L1O75674 476 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 ADRB1P08588 477 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 MARCKSP29966 332 aaPredicted RBP14.93□□□□□ -0.02
SAMM50-204ENST00000493161 TNFSF9P41273 254 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 KPNA1P52294 538 aaPredicted RBP14.93□□□□□ -0.02
SAMM50-204ENST00000493161 YWHAHQ04917 246 aaPredicted RBP14.93□□□□□ -0.02
SAMM50-204ENST00000493161 FCHO2Q0JRZ9 810 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 PPP2R5DQ14738 602 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 NOLC1Q14978 699 aaKnown RBP eCLIP14.93□□□□□ -0.02
SAMM50-204ENST00000493161 PPM1JQ5JR12 505 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 GAREM2Q75VX8 874 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 ARID3BQ8IVW6 561 aaPredicted RBP14.93□□□□□ -0.02
SAMM50-204ENST00000493161 LEMD2Q8NC56 503 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 TMEM161BQ8NDZ6 487 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 CSGALNACT1Q8TDX6 532 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 DRC1Q96MC2 740 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 TMEM209Q96SK2 561 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 NTPCRQ9BSD7 190 aaKnown RBP14.93□□□□□ -0.02
SAMM50-204ENST00000493161 GTSE1Q9NYZ3 720 aa14.93□□□□□ -0.02
SAMM50-204ENST00000493161 SPECC1L-ADORA2AF8WAN1 911 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 CHADO15335 359 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 SEC24BO95487 1268 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 MAPTP10636 758 aaKnown RBP14.92□□□□□ -0.02
SAMM50-204ENST00000493161 TRAPPC10P48553 1259 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 GNL2Q13823 731 aaKnown RBP14.92□□□□□ -0.02
SAMM50-204ENST00000493161 ZBTB6Q15916 424 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 PRR23CQ6ZRP0 262 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 YAF2Q8IY57 180 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 ATAD1Q8NBU5 361 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 NETO1Q8TDF5 533 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 KIF12Q96FN5 646 aa14.92□□□□□ -0.02
SAMM50-204ENST00000493161 PLIN2Q99541 437 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms