RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 STX10O60499 249 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 MYOGP15173 224 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 RABGGTBP53611 331 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 EXOC3L4Q17RC7 722 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 PHLDB3Q6NSJ2 640 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 GJB7Q6PEY0 223 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 TRIM65Q6PJ69 517 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 SPRED2Q7Z698 418 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 ABI1Q8IZP0 508 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 SP7Q8TDD2 431 aaPredicted RBP10.08□□□□□ -0.8
CSTF1-206ENST00000493039 CALR3Q96L12 384 aaKnown RBP10.08□□□□□ -0.8
CSTF1-206ENST00000493039 SLC9A7Q96T83 725 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 GCNT4Q9P109 453 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 AJAP1Q9UKB5 411 aaPredicted RBP10.08□□□□□ -0.8
CSTF1-206ENST00000493039 ITGA11Q9UKX5 1188 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 MRPL42Q9Y6G3 142 aaKnown RBP10.08□□□□□ -0.8
CSTF1-206ENST00000493039 RALGAPA2Q2PPJ7 1873 aa10.08□□□□□ -0.8
CSTF1-206ENST00000493039 ADCY5O95622 1261 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 GALTP07902 379 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 KRT19P08727 400 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 CCDC172P0C7W6 258 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 BMP8BP34820 402 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 SLC11A1P49279 550 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 MRE11P49959 708 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 LILRA4P59901 499 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 RBP5P82980 135 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 ZFYVE27Q5T4F4 411 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 GBP6Q6ZN66 633 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 URGCPQ8TCY9 931 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 BCL7CQ8WUZ0 217 aaPredicted RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 KAT5Q92993 513 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 RNPC3Q96LT9 517 aaKnown RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 FAM210AQ96ND0 272 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 RAD9AQ99638 391 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 INTS2Q9H0H0 1204 aaKnown RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 IGSF5Q9NSI5 407 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 FNDC1Q4ZHG4 1894 aaPredicted RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 SCN1AP35498 2009 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 PDCD11Q14690 1871 aaKnown RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 A0A1W2PQC6 194 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 ANKRD62A6NC57 917 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 NT5C1B-RDH14C9J2C7 533 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 PODXLO00592 558 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 NRP1O14786 923 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 N4BP1O75113 896 aaKnown RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 RPL9P32969 192 aaKnown RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 RNASELQ05823 741 aaKnown RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 LRMPQ12912 555 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 BTG3Q14201 252 aaPredicted RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 FILIP1LQ4L180 1135 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 ARHGEF19Q8IW93 802 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 CMTR2Q8IYT2 770 aaKnown RBP10.07□□□□□ -0.8
CSTF1-206ENST00000493039 LRRC43Q8N309 656 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 MRFAP1L1Q96HT8 127 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 HPDLQ96IR7 371 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 YME1L1Q96TA2 773 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 TTYH3Q9C0H2 523 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 GANQ9H2C0 597 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 VRTNQ9H8Y1 702 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 MARCH5Q9NX47 278 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 INSL6Q9Y581 213 aa10.07□□□□□ -0.8
CSTF1-206ENST00000493039 ZC3H11AO75152 810 aaKnown RBP eCLIP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 PHACTR2O75167 634 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 COQ9O75208 318 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 STAU1O95793 577 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 EFEMP2O95967 443 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 PBX2P40425 430 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 PIK3CAP42336 1068 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 AARSP49588 968 aaKnown RBP eCLIP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 BCAR1P56945 870 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 MLLT1Q03111 559 aaPredicted RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 SGSM1Q2NKQ1 1148 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 FKBP15Q5T1M5 1219 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 KLHDC7AQ5VTJ3 777 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 LIMS2Q7Z4I7 341 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 VSTM4Q8IW00 320 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 LRRC52Q8N7C0 313 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 RSPH1Q8WYR4 309 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 KREMEN1Q96MU8 473 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 NAA15Q9BXJ9 866 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 MRPL9Q9BYD2 267 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 PLCB1Q9NQ66 1216 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 FAM207AQ9NSI2 230 aaPredicted RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 POLIQ9UNA4 740 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 PRG3Q9Y2Y8 225 aaPredicted RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 I3L4J1 428 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 XPOTO43592 962 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 TLL1O43897 1013 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 B3GAT3O94766 335 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 ZRANB2O95218 330 aaKnown RBP eCLIP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 ALDH2P05091 517 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 BRCC3P46736 316 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 OR1G1P47890 313 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 NOP14P78316 857 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 TRPC3Q13507 836 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 WDR72Q3MJ13 1102 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 TIGD5Q53EQ6 642 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 DCLRE1AQ6PJP8 1040 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 RRAGAQ7L523 313 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 HASPINQ8TF76 798 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms