RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 TTC26A0AVF1 554 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 MAN2B1O00754 1011 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 CLDN3O15551 220 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 CPB1P15086 417 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 AARSP49588 968 aaKnown RBP eCLIP21.68■■□□□ 1.06
NELFE-212ENST00000492539 NCKAP1LP55160 1127 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 CUL4AQ13619 759 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 ZRSR1Q15695 479 aaKnown RBP21.68■■□□□ 1.06
NELFE-212ENST00000492539 ZBTB6Q15916 424 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 VITQ6UXI7 678 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 SMARCD2Q92925 531 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 IRF7Q92985 503 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 ZSWIM3Q96MP5 696 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 TRPV4Q9HBA0 871 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 DLL3Q9NYJ7 618 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 KIF3AQ9Y496 699 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.68■■□□□ 1.06
NELFE-212ENST00000492539 TSC2P49815 1807 aa21.68■■□□□ 1.06
NELFE-212ENST00000492539 ANK1P16157 1881 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 OAZ2O95190 189 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 VNN2O95498 520 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 CLTAP09496 248 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 PLA2G4BP0C869 781 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 PSMC3P17980 439 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 CYP3A5P20815 502 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 PUM1Q14671 1186 aaKnown RBP eCLIP21.67■■□□□ 1.06
NELFE-212ENST00000492539 TMEM119Q4V9L6 283 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 DGLUCYQ7Z3D6 616 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 DEPDC1BQ8WUY9 529 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 ATRIPQ8WXE1 791 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 OXCT2Q9BYC2 517 aaPredicted RBP21.67■■□□□ 1.06
NELFE-212ENST00000492539 EPC1Q9H2F5 836 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 ZNF334Q9HCZ1 680 aaPredicted RBP21.67■■□□□ 1.06
NELFE-212ENST00000492539 ASAH2Q9NR71 780 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 YIPF1Q9Y548 306 aa21.67■■□□□ 1.06
NELFE-212ENST00000492539 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.67■■□□□ 1.06
NELFE-212ENST00000492539 NCANO14594 1321 aa21.66■■□□□ 1.06
NELFE-212ENST00000492539 K7ELQ4 463 aaPredicted RBP21.66■■□□□ 1.06
NELFE-212ENST00000492539 MARCKSP29966 332 aaPredicted RBP21.66■■□□□ 1.06
NELFE-212ENST00000492539 YWHAHQ04917 246 aaPredicted RBP21.66■■□□□ 1.06
NELFE-212ENST00000492539 SPAG1Q07617 926 aa21.66■■□□□ 1.06
NELFE-212ENST00000492539 MTAPQ13126 283 aa21.66■■□□□ 1.06
NELFE-212ENST00000492539 TSSK4Q6SA08 328 aa21.66■■□□□ 1.06
NELFE-212ENST00000492539 KIF12Q96FN5 646 aa21.66■■□□□ 1.06
NELFE-212ENST00000492539 PLIN2Q99541 437 aa21.66■■□□□ 1.06
NELFE-212ENST00000492539 LRRC3Q9BY71 257 aa21.66■■□□□ 1.06
NELFE-212ENST00000492539 CHRDQ9H2X0 955 aa21.66■■□□□ 1.06
NELFE-212ENST00000492539 LARSQ9P2J5 1176 aaKnown RBP21.66■■□□□ 1.06
NELFE-212ENST00000492539 UBQLN1Q9UMX0 589 aaKnown RBP21.66■■□□□ 1.06
NELFE-212ENST00000492539 NUP210Q8TEM1 1887 aaPredicted RBP21.66■■□□□ 1.06
NELFE-212ENST00000492539 NPHP3-ACAD11A0A0J9YXS1 232 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 MED19A0JLT2 244 aaPredicted RBP21.65■■□□□ 1.06
NELFE-212ENST00000492539 VWA3AA6NCI4 1184 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 H0YCG3 227 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 FAM189A1O60320 539 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 MYL4P12829 197 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 TDGF1P13385 188 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 GJA1P17302 382 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 GJB2P29033 226 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 GDI1P31150 447 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 TNFSF9P41273 254 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 VIPR2P41587 438 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 CACNB1Q02641 598 aaPredicted RBP21.65■■□□□ 1.06
NELFE-212ENST00000492539 TEAD2Q15562 447 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 ARSHQ5FYA8 562 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 MAMSTRQ6ZN01 415 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 TMC8Q8IU68 726 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 ZSCAN18Q8TBC5 510 aaPredicted RBP21.65■■□□□ 1.06
NELFE-212ENST00000492539 IER2Q9BTL4 223 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 FAM126AQ9BYI3 521 aaPredicted RBP21.65■■□□□ 1.06
NELFE-212ENST00000492539 CRISPLD1Q9H336 500 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 NCDNQ9UBB6 729 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 NDRG2Q9UN36 371 aaKnown RBP21.65■■□□□ 1.06
NELFE-212ENST00000492539 SMC3Q9UQE7 1217 aa21.65■■□□□ 1.06
NELFE-212ENST00000492539 TIMM13Q9Y5L4 95 aaPredicted RBP21.65■■□□□ 1.06
NELFE-212ENST00000492539 ARNTLO00327 626 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 ADRB2P07550 413 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 OR4Q2P0C623 313 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 MATR3P43243 847 aaKnown RBP eCLIP21.64■■□□□ 1.05
NELFE-212ENST00000492539 PPP2R3AQ06190 1150 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 GPR17Q13304 367 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 ARL6IP4Q66PJ3 421 aaKnown RBP21.64■■□□□ 1.05
NELFE-212ENST00000492539 MCTP1Q6DN14 999 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 HAUS6Q7Z4H7 955 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 MFSD6LQ8IWD5 586 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 SHKBP1Q8TBC3 707 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 FAM3CQ92520 227 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 CDK5RAP3Q96JB5 506 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 GPR88Q9GZN0 384 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 DNAJC25Q9H1X3 360 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 ODF2LQ9ULJ1 636 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 SMG5Q9UPR3 1016 aaKnown RBP21.64■■□□□ 1.05
NELFE-212ENST00000492539 PIAS3Q9Y6X2 628 aa21.64■■□□□ 1.05
NELFE-212ENST00000492539 OR6C75A6NL08 312 aa21.63■■□□□ 1.05
NELFE-212ENST00000492539 LACTBL1A8MY62 500 aa21.63■■□□□ 1.05
NELFE-212ENST00000492539 PIGRP01833 764 aa21.63■■□□□ 1.05
NELFE-212ENST00000492539 PLD1Q13393 1074 aa21.63■■□□□ 1.05
NELFE-212ENST00000492539 KYAT1Q16773 422 aa21.63■■□□□ 1.05
NELFE-212ENST00000492539 GPR161Q8N6U8 529 aaKnown RBP21.63■■□□□ 1.05
NELFE-212ENST00000492539 BICD1Q96G01 975 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms