RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 TRAPPC11Q7Z392 1133 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 CEP57Q86XR8 500 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 CREBRFQ8IUR6 639 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 MRPL43Q8N983 215 aaKnown RBP12.88□□□□□ -0.35
PTPN7-214ENST00000491584 ANKRD20A12PQ8NF67 263 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 CDCA3Q99618 268 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-214ENST00000491584 ANP32EQ9BTT0 268 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 SRRTQ9BXP5 876 aaKnown RBP12.88□□□□□ -0.35
PTPN7-214ENST00000491584 IMPG2Q9BZV3 1241 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
PTPN7-214ENST00000491584 TLE6Q9H808 572 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 KIAA1671Q9BY89 1806 aa12.88□□□□□ -0.35
PTPN7-214ENST00000491584 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 SMTNL1A8MU46 457 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 PIRO00625 290 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 HUS1O60921 280 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 N4BP1O75113 896 aaKnown RBP12.87□□□□□ -0.35
PTPN7-214ENST00000491584 TRIM21P19474 475 aaKnown RBP12.87□□□□□ -0.35
PTPN7-214ENST00000491584 CASP4P49662 377 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 LILRA4P59901 499 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 CLDN10P78369 228 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 ZP2Q05996 745 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 BFSP1Q12934 665 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 SGSM1Q2NKQ1 1148 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 THEM5Q8N1Q8 247 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 TAF4BQ92750 862 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 SUSD3Q96L08 255 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 HERC2P3Q9BVR0 1158 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 HCSTQ9UBK5 93 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 TUBGCP4Q9UGJ1 667 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 IRAK3Q9Y616 596 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 USP34Q70CQ2 3546 aa12.87□□□□□ -0.35
PTPN7-214ENST00000491584 MUC6Q6W4X9 2439 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 ANO9A1A5B4 782 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 PRR33A8MZF0 331 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 KPNA7A9QM74 516 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 KIF4AO95239 1232 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 C1RP00736 705 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 ITGB3P05106 788 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 ADH1AP07327 375 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 FAM163BP0C2L3 166 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 ODC1P11926 461 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 TPM4P67936 248 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 DSG1Q02413 1049 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 SOX4Q06945 474 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-214ENST00000491584 CAMK1Q14012 370 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 NFKBIBQ15653 356 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 PUS10Q3MIT2 529 aaKnown RBP12.86□□□□□ -0.35
PTPN7-214ENST00000491584 DPCR1Q3MIW9 517 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 WDR44Q5JSH3 913 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 DPH6Q7L8W6 267 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 ZSWIM2Q8NEG5 633 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 ENOX1Q8TC92 643 aaKnown RBP12.86□□□□□ -0.35
PTPN7-214ENST00000491584 RIN2Q8WYP3 895 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-214ENST00000491584 RABGGTAQ92696 567 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 HPDLQ96IR7 371 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 POP1Q99575 1024 aaKnown RBP12.86□□□□□ -0.35
PTPN7-214ENST00000491584 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 CXCL16Q9H2A7 254 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 THAP9Q9H5L6 903 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 GOLGA2P5Q9HBQ8 144 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 CHST7Q9NS84 486 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 TMEM63CQ9P1W3 806 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 PCDHB8Q9UN66 801 aa12.86□□□□□ -0.35
PTPN7-214ENST00000491584 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 TRIM49BA6NDI0 452 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 CYB561D2O14569 222 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 MEFVO15553 781 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 TYMPP19971 482 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 CDK11BP21127 795 aaKnown RBP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 FGFR3P22607 806 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 KLRC2P26717 231 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 POLR2BP30876 1174 aaKnown RBP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 PMS1P54277 932 aaKnown RBP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 ERVFC1P60507 584 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 TYRO3Q06418 890 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 HYAL1Q12794 435 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 PLPP4Q5VZY2 271 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 KRT39Q6A163 491 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 ZC3H3Q8IXZ2 948 aaKnown RBP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 EFCAB13Q8IY85 973 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 TMEM86AQ8N2M4 240 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 C1orf127Q8N9H9 656 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 HASPINQ8TF76 798 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 EEF2KMTQ96G04 330 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 GPR62Q9BZJ7 368 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 TMEM8AQ9HCN3 771 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 MARCH5Q9NX47 278 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 FNIP2Q9P278 1114 aa12.85□□□□□ -0.35
PTPN7-214ENST00000491584 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.85□□□□□ -0.35
PTPN7-214ENST00000491584 C2orf71A6NGG8 1288 aa12.84□□□□□ -0.35
PTPN7-214ENST00000491584 LRRIQ3A6PVS8 624 aaPredicted RBP12.84□□□□□ -0.35
PTPN7-214ENST00000491584 BECN2A8MW95 431 aa12.84□□□□□ -0.35
PTPN7-214ENST00000491584 M0QZQ0 153 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms