RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 HSPA4P34932 840 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 PLD1Q13393 1074 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 PTPAQ15257 358 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 TRIP11Q15643 1979 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 SH3PXD2AQ5TCZ1 1133 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 HEATR6Q6AI08 1181 aaKnown RBP12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 PIK3AP1Q6ZUJ8 805 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 DEPTORQ8TB45 409 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 TCEAL4Q96EI5 215 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 ARRDC1-AS1Q9H2J1 176 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 SLITRK6Q9H5Y7 841 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 BRMS1Q9HCU9 246 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 AFF4Q9UHB7 1163 aaKnown RBP12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 GDAQ9Y2T3 454 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 MYBPHLA2RUH7 354 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 HEPACAM2A8MVW5 462 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 ARNTLO00327 626 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 DPYSL4O14531 572 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 AXIN1O15169 862 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 ATG13O75143 517 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 RPP40O75818 363 aaKnown RBP12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 MYL4P12829 197 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 CEACAM1P13688 526 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 ATP2B1P20020 1258 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 VIPR2P41587 438 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 NAMPTP43490 491 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 BRCC3P46736 316 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 EFNA5P52803 228 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 EPHA5P54756 1037 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 ARPP19P56211 112 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 FCHO2Q0JRZ9 810 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 SRSF5Q13243 272 aaKnown RBP12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 GAS6Q14393 721 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 CALCRLQ16602 461 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 ARHGAP29Q52LW3 1261 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 ZNF280DQ6N043 979 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 APPL2Q8NEU8 664 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 PIGOQ8TEQ8 1089 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 GAB3Q8WWW8 586 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 UBL7Q96S82 380 aaPredicted RBP12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 CCDC94Q9BW85 323 aaPredicted RBP12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 OXCT2Q9BYC2 517 aaPredicted RBP12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 TPCN1Q9ULQ1 816 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 KCNJ14Q9UNX9 436 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 NUB1Q9Y5A7 615 aa12.23□□□□□ -0.45
CLCNKA-206ENST00000491433 SPECC1L-ADORA2AF8WAN1 911 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 HYAL3O43820 417 aaPredicted RBP12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 C1QL1O75973 258 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 FGF19O95750 216 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 CCDC192P0DO97 292 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 RPL9P32969 192 aaKnown RBP12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 CCR2P41597 374 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 RAP1GAPP47736 663 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 PLCB2Q00722 1185 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 CTXN3Q4LDR2 81 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 GLRA4Q5JXX5 417 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 DAB2IPQ5VWQ8 1189 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 KIAA1211LQ6NV74 962 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 POTEHQ6S545 545 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 RUFY3Q7L099 469 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 MAEAQ7L5Y9 396 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 HNRNPLLQ8WVV9 542 aaKnown RBP12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 IFT74Q96LB3 600 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 ZSWIM3Q96MP5 696 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 NACC1Q96RE7 527 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 CLMPQ9H6B4 373 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 TTC12Q9H892 705 aaPredicted RBP12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 TUFT1Q9NNX1 390 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 VPS45Q9NRW7 570 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 OBP2AQ9NY56 170 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 ASXL3Q9C0F0 2248 aa12.22□□□□□ -0.45
CLCNKA-206ENST00000491433 PHLPP2Q6ZVD8 1323 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 STK36Q9NRP7 1315 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 SMIM28A0A1B0GU29 152 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 I3L4J1 428 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 PODXLO00592 558 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 SEC24AO95486 1093 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 CPB1P15086 417 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 LIG1P18858 919 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 CTHP32929 405 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 TWF1Q12792 350 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 MRPL58Q14197 206 aaKnown RBP12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 TEAD2Q15562 447 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 PLA2G2CQ5R387 149 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 ATF7IP2Q5U623 682 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 CD300LGQ6UXG3 332 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 CAMKK1Q8N5S9 505 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 C3orf58Q8NDZ4 430 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 SLC39A7Q92504 469 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 WASF1Q92558 559 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 EXOC4Q96A65 974 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 AIFM3Q96NN9 605 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 CCDC113Q9H0I3 377 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 GPRC5CQ9NQ84 441 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 RBM12Q9NTZ6 932 aaKnown RBP12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 FBXL5Q9UKA1 691 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 KLK13Q9UKR3 277 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 CYP46A1Q9Y6A2 500 aa12.21□□□□□ -0.45
CLCNKA-206ENST00000491433 NUP210Q8TEM1 1887 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms