RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 NAP1L5Q96NT1 182 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 SAMD11Q96NU1 681 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 MMS19Q96T76 1030 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 NIF3L1Q9GZT8 377 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 NRDE2Q9H7Z3 1164 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 GOLGA2P5Q9HBQ8 144 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 FAM207AQ9NSI2 230 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 MIOSQ9NXC5 875 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 NXF1Q9UBU9 619 aaKnown RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 APEX2Q9UBZ4 518 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 DSEQ9UL01 958 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 PLAGL2Q9UPG8 496 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 PRG3Q9Y2Y8 225 aaPredicted RBP11.76□□□□□ -0.53
VARS2-210ENST00000490699 PCDHA11Q9Y5I1 949 aa11.76□□□□□ -0.53
VARS2-210ENST00000490699 SF3B1O75533 1304 aaKnown RBP eCLIP11.76□□□□□ -0.53
VARS2-210ENST00000490699 ANO9A1A5B4 782 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 KPNA7A9QM74 516 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 TMEM189-UBE2V1I3L0A0 370 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 PIRO00625 290 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 MEFVO15553 781 aaPredicted RBP11.75□□□□□ -0.53
VARS2-210ENST00000490699 ADCY5O95622 1261 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 ASS1P00966 412 aaKnown RBP11.75□□□□□ -0.53
VARS2-210ENST00000490699 CCDC172P0C7W6 258 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 PON1P27169 355 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 AFF1P51825 1210 aaKnown RBP11.75□□□□□ -0.53
VARS2-210ENST00000490699 GUCY2FP51841 1108 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 BCAR1P56945 870 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 LRMPQ12912 555 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 APTXQ7Z2E3 356 aaKnown RBP11.75□□□□□ -0.53
VARS2-210ENST00000490699 TMCO2Q7Z6W1 182 aaPredicted RBP11.75□□□□□ -0.53
VARS2-210ENST00000490699 ZNF280BQ86YH2 543 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 APPL2Q8NEU8 664 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 SPAG5Q96R06 1193 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 TMEM121BQ9BXQ6 578 aaPredicted RBP11.75□□□□□ -0.53
VARS2-210ENST00000490699 NUCKS1Q9H1E3 243 aaKnown RBP11.75□□□□□ -0.53
VARS2-210ENST00000490699 FAM124BQ9H5Z6 455 aaPredicted RBP11.75□□□□□ -0.53
VARS2-210ENST00000490699 VRTNQ9H8Y1 702 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 PLCB1Q9NQ66 1216 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 SPG21Q9NZD8 308 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 PUF60Q9UHX1 559 aaKnown RBP11.75□□□□□ -0.53
VARS2-210ENST00000490699 SNX9Q9Y5X1 595 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 ITIH6Q6UXX5 1313 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
VARS2-210ENST00000490699 NRP1O14786 923 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 TEX33O43247 280 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 NRDCO43847 1150 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 DDHD2O94830 711 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 KIF4AO95239 1232 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 VNN1O95497 513 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 CDC25BP30305 580 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 CTNNB1P35222 781 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 LILRA4P59901 499 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 GCNT1Q02742 428 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 SOX4Q06945 474 aaPredicted RBP11.74□□□□□ -0.53
VARS2-210ENST00000490699 RAPGEF1Q13905 1077 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 NAB2Q15742 525 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 SMYD5Q6GMV2 418 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 KIAA1841Q6NSI8 718 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 PDXDC1Q6P996 788 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 KCNT2Q6UVM3 1135 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 DPH6Q7L8W6 267 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 TMC6Q7Z403 805 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 TMEM86AQ8N2M4 240 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 JAKMIP2Q96AA8 810 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 PI4K2AQ9BTU6 479 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 SNX25Q9H3E2 840 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 CYP3A43Q9HB55 503 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 UBE2TQ9NPD8 197 aaPredicted RBP11.74□□□□□ -0.53
VARS2-210ENST00000490699 ZNHIT6Q9NWK9 470 aaKnown RBP11.74□□□□□ -0.53
VARS2-210ENST00000490699 CEP72Q9P209 647 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 DNAJB4Q9UDY4 337 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 SIX4Q9UIU6 781 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 ADAM28Q9UKQ2 775 aa11.74□□□□□ -0.53
VARS2-210ENST00000490699 MRPL42Q9Y6G3 142 aaKnown RBP11.74□□□□□ -0.53
VARS2-210ENST00000490699 A0A1W2PPC1 479 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 CYB561D2O14569 222 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 LPXNO60711 386 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 CST3P01034 146 aaPredicted RBP11.73□□□□□ -0.53
VARS2-210ENST00000490699 GALTP07902 379 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 SLC9A1P19634 815 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 SLC11A1P49279 550 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 CUL2Q13617 745 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 FIGNQ5HY92 759 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 SCARA5Q6ZMJ2 495 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 VSTM4Q8IW00 320 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 THEM5Q8N1Q8 247 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 TOP6BLQ8N6T0 577 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 COLGALT1Q8NBJ5 622 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 HASPINQ8TF76 798 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 SEMA4DQ92854 862 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 PLVAPQ9BX97 442 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 EDEM3Q9BZQ6 932 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 CXCL16Q9H2A7 254 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 RC3H2Q9HBD1 1191 aaKnown RBP11.73□□□□□ -0.53
VARS2-210ENST00000490699 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.73□□□□□ -0.535e-7■■■■■ 26.9
VARS2-210ENST00000490699 GDAP2Q9NXN4 497 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 FBXL5Q9UKA1 691 aa11.73□□□□□ -0.53
VARS2-210ENST00000490699 SSX2IPQ9Y2D8 614 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms