RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ADGRF2Q8IZF7 708 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 C7orf43Q8WVR3 580 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 MRPS31Q92665 395 aaKnown RBP15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 WNT8AQ9H1J5 351 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 DDX56Q9NY93 547 aaKnown RBP15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 CYP3A7-CYP3A51PA0A087WV96 503 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 ANO9A1A5B4 782 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 NCK2O43639 380 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 MAPTP10636 758 aaKnown RBP15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 IRF1P10914 325 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 CYP3A7P24462 503 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 AXLP30530 894 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 FUT2Q10981 343 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 TDRD10Q5VZ19 366 aaKnown RBP15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 WDR49Q8IV35 697 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 TLK1Q9UKI8 766 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 NFASCO94856 1347 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 MAPK8IP2Q13387 824 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 MIB1Q86YT6 1006 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 MORC4Q8TE76 937 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 FMO2Q99518 471 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 ROBO3Q96MS0 1386 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 GMNNO75496 209 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 ST8SIA6P61647 398 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 ADCY1Q08828 1119 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 OVOS1Q6IE37 1185 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 CENPUQ71F23 418 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 PLPPR4Q7Z2D5 763 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 CHSY1Q86X52 802 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 NUDCD1Q96RS6 583 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 HTATIP2Q9BUP3 242 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 KIAA1257Q9ULG3 409 aa15.18■□□□□ 0.02
ARHGEF39-205ENST00000490638 F5H423 210 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 PODXLO00592 558 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 AMHP03971 560 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 ZFXP17010 805 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 PPARGP37231 505 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 MSH2P43246 934 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 YWHAHQ04917 246 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 CRHR2Q13324 411 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 NBPF20Q3BBV1 942 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 DCLK2Q8N568 766 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 C1orf131Q8NDD1 294 aaKnown RBP15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 NKX2-3Q8TAU0 364 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 DYRK4Q9NR20 520 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 INTS13Q9NVM9 706 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 DFFAO00273 331 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 PPP1R11O60927 126 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 RECQL4O94761 1208 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 RPL10AP62906 217 aaKnown RBP15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 KIAA0319LQ8IZA0 1049 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 KIAA0895Q8NCT3 520 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 ZNF507Q8TCN5 953 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 BHMTQ93088 406 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 RILPQ96NA2 401 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 ARHGAP15Q53QZ3 475 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 FAM171A1Q5VUB5 890 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 ATP6V1E2Q96A05 226 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 VPS39Q96JC1 886 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 KLHL11Q9NVR0 708 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 ITIH6Q6UXX5 1313 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 HARS2P49590 506 aaKnown RBP15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 ANKRD20A3Q5VUR7 823 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 C1orf186Q6ZWK4 172 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 C12orf42Q96LP6 360 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 MRPL9Q9BYD2 267 aaKnown RBP15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 DDIT4Q9NX09 232 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 DSEQ9UL01 958 aa15.17■□□□□ 0.02
ARHGEF39-205ENST00000490638 PON1P27169 355 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 LHX1P48742 406 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 ITGA7Q13683 1181 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 NOL9Q5SY16 702 aaKnown RBP15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 SPOPLQ6IQ16 392 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 ZNF677Q86XU0 584 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 PGBD3Q8N328 593 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 SLC35G2Q8TBE7 412 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 CELF4Q9BZC1 486 aaKnown RBP15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 TMEM117Q9H0C3 514 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 DDX47Q9H0S4 455 aaKnown RBP15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 CISHQ9NSE2 258 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 RNF19AQ9NV58 838 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 ANGPTL3Q9Y5C1 460 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 VDRP11473 427 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 ITGB3BPQ13352 177 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 PIGHQ14442 188 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 TMEM199Q8N511 208 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 FBXO32Q969P5 355 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 CYP4F11Q9HBI6 524 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 BFARQ9NZS9 450 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 RBPJLQ9UBG7 517 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 F8W8V4 182 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 GYPCP04921 128 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 GLRA2P23416 452 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 SLC1A1P43005 524 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 HIRAP54198 1017 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms