RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 RTL10Q7L3V2 364 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 USP37Q86T82 979 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 NPAS3Q8IXF0 933 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 SYCP3Q8IZU3 236 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 GPR152Q8TDT2 470 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 FGF14Q92915 247 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 DHX58Q96C10 678 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 SAAL1Q96ER3 474 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 PGLYRP2Q96PD5 576 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 ACCSQ96QU6 501 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 TSPAN18Q96SJ8 248 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 PRRX2Q99811 253 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 STRA6Q9BX79 667 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 PANK4Q9NVE7 773 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 CA14Q9ULX7 337 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 EXOC7Q9UPT5 735 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 MRPS23Q9Y3D9 190 aaKnown RBP11.23□□□□□ -0.61
RBM39-236ENST00000490484 STYXL1Q9Y6J8 313 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 ZFP37Q9Y6Q3 630 aaPredicted RBP11.23□□□□□ -0.61
RBM39-236ENST00000490484 CACNA1HO95180 2353 aa11.23□□□□□ -0.61
RBM39-236ENST00000490484 SPTLC1O15269 473 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 OAZ2O95190 189 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 F13A1P00488 732 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 ODC1P11926 461 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 CEBPBP17676 345 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 RFX1P22670 979 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 TWF1Q12792 350 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 ALCAMQ13740 583 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 E2F4Q16254 413 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 OVOS1Q6IE37 1185 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 RNF19BQ6ZMZ0 732 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 MTSS1LQ765P7 747 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 EFCAB13Q8IY85 973 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 TCEAL8Q8IYN2 117 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 NOC3LQ8WTT2 800 aaKnown RBP11.22□□□□□ -0.61
RBM39-236ENST00000490484 HPS3Q969F9 1004 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 NXPE3Q969Y0 559 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 NOTCH4Q99466 2003 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 KXD1Q9BQD3 176 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 CORO1BQ9BR76 489 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 FAM213AQ9BRX8 229 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 RPP25Q9BUL9 199 aaKnown RBP11.22□□□□□ -0.61
RBM39-236ENST00000490484 TNMDQ9H2S6 317 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 ASB7Q9H672 318 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 FAM86C1Q9NVL1 165 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 AFF4Q9UHB7 1163 aaKnown RBP11.22□□□□□ -0.61
RBM39-236ENST00000490484 KCNH3Q9ULD8 1083 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 DERAQ9Y315 318 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 C2CD2Q9Y426 696 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 YIPF1Q9Y548 306 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 USP34Q70CQ2 3546 aa11.22□□□□□ -0.61
RBM39-236ENST00000490484 VPS13AQ96RL7 3174 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 KRBA1A5PL33 1030 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 PIRO00625 290 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
RBM39-236ENST00000490484 CUTAO60888 179 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 PRPF6O94906 941 aaKnown RBP11.21□□□□□ -0.61
RBM39-236ENST00000490484 NPR3P17342 541 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 CLCN5P51795 746 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 WNT7BP56706 349 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 LILRA4P59901 499 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 POSTNQ15063 836 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 CRELD2Q6UXH1 353 aaPredicted RBP11.21□□□□□ -0.61
RBM39-236ENST00000490484 PDZD4Q76G19 769 aaPredicted RBP11.21□□□□□ -0.61
RBM39-236ENST00000490484 ALYREFQ86V81 257 aaKnown RBP11.21□□□□□ -0.61
RBM39-236ENST00000490484 CCDC65Q8IXS2 484 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 ELMOD1Q8N336 334 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 GLIS3Q8NEA6 775 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 ZSWIM2Q8NEG5 633 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 KCNG4Q8TDN1 519 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 SENP8Q96LD8 212 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 PHOX2BQ99453 314 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 CBWD1Q9BRT8 395 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 ARHGEF3Q9NR81 526 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 DPP3Q9NY33 737 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 RBAKQ9NYW8 714 aaPredicted RBP11.21□□□□□ -0.61
RBM39-236ENST00000490484 WNT16Q9UBV4 365 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 PCDHB13Q9Y5F0 798 aa11.21□□□□□ -0.61
RBM39-236ENST00000490484 COL4A3Q01955 1670 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 ANO9A1A5B4 782 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 GOLGA8IPA6NC78 632 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 OR6C75A6NL08 312 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 GOLGA8JA6NMD2 632 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 H0Y858 1186 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 STK25O00506 426 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 PI15O43692 258 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 IL18RAPO95256 599 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 VNN2O95498 520 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 PTPN2P17706 415 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 AOC1P19801 751 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 TYMPP19971 482 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 ME1P48163 572 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 TAF6P49848 677 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 MRE11P49959 708 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 ASIC1P78348 528 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 TFAMQ00059 246 aaKnown RBP11.2□□□□□ -0.62
RBM39-236ENST00000490484 PRSS36Q5K4E3 855 aa11.2□□□□□ -0.62
RBM39-236ENST00000490484 IQCEQ6IPM2 695 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms