RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 TDP1Q9NUW8 608 aa5.97□□□□□ -1.45
SSX2IP-208ENST00000490476 FBXO10Q9UK96 956 aa5.97□□□□□ -1.45
SSX2IP-208ENST00000490476 PHTF1Q9UMS5 762 aa5.97□□□□□ -1.45
SSX2IP-208ENST00000490476 PCDHB1Q9Y5F3 818 aa5.97□□□□□ -1.45
SSX2IP-208ENST00000490476 CFAP20Q9Y6A4 193 aaKnown RBP5.97□□□□□ -1.45
SSX2IP-208ENST00000490476 DAPK1P53355 1430 aa5.97□□□□□ -1.45
SSX2IP-208ENST00000490476 YTHDC2Q9H6S0 1430 aaKnown RBP5.97□□□□□ -1.45
SSX2IP-208ENST00000490476 ITGB4P16144 1822 aa5.97□□□□□ -1.45
SSX2IP-208ENST00000490476 CFAP47Q6ZTR5 3102 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 CFAP69A5D8W1 941 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 CAPN8A6NHC0 703 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 DDX3XO00571 662 aaKnown RBP eCLIP5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 MAFO75444 373 aaPredicted RBP5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 CELF2O95319 508 aaKnown RBP5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 GAAP10253 952 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 TAL1P17542 331 aaPredicted RBP5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 ITGB5P18084 799 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 ECHS1P30084 290 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 IL13P35225 146 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 FAM193AP78312 1265 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 ADAM15Q13444 863 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 CNN3Q15417 329 aaKnown RBP5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 LONRF1Q17RB8 773 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 ANO6Q4KMQ2 910 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 RNF220Q5VTB9 566 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 TTC7BQ86TV6 843 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 RSPH3Q86UC2 560 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 MORC1Q86VD1 984 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 SMC5Q8IY18 1101 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 SH2D3CQ8N5H7 860 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 LINC00482Q8N8I6 264 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 PIK3C3Q8NEB9 887 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 NUDT10Q8NFP7 164 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 FBXO18Q8NFZ0 1043 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 PPP1R14CQ8TAE6 165 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 KLHDC4Q8TBB5 520 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 CCHCR1Q8TD31 782 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 ZCCHC14Q8WYQ9 949 aaKnown RBP5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 NUDT11Q96G61 164 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 TNIP3Q96KP6 325 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 GUCD1Q96NT3 240 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 STRBPQ96SI9 672 aaKnown RBP5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 OSBPL6Q9BZF3 934 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 BHMT2Q9H2M3 363 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 L2HGDHQ9H9P8 463 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 TLR9Q9NR96 1032 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 FAM53CQ9NYF3 392 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 STAP2Q9UGK3 403 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 TAGLN3Q9UI15 199 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 PCDHA3Q9Y5H8 950 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 FLNBO75369 2602 aaKnown RBP5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 CPSF1Q10570 1443 aaKnown RBP5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 KIF7Q2M1P5 1343 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 RNF123Q5XPI4 1314 aa5.96□□□□□ -1.46
SSX2IP-208ENST00000490476 SEMA7AO75326 666 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 EIF3JO75822 258 aaKnown RBP5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 PLA2G1BP04054 148 aaKnown RBP5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 COL6A1P12109 1028 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 MEOX1P50221 254 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 RRADP55042 308 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 DLG4P78352 724 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 THEMIS2Q5TEJ8 643 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 SRLQ86TD4 932 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 SKAP1Q86WV1 359 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 KIAA0319LQ8IZA0 1049 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 FAM43AQ8N2R8 423 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 PQLC1Q8N2U9 271 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 MSL3Q8N5Y2 521 aaKnown RBP5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 VPS37AQ8NEZ2 397 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 MAFAQ8NHW3 353 aaPredicted RBP5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 SNX33Q8WV41 574 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 NKD2Q969F2 451 aaPredicted RBP5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 CDK5RAP3Q96JB5 506 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 TBCBQ99426 244 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 NAA15Q9BXJ9 866 aaKnown RBP5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 GCM1Q9NP62 436 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 PUF60Q9UHX1 559 aaKnown RBP5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 ANKRD50Q9ULJ7 1429 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 C5orf42Q9H799 3197 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 TTC21AQ8NDW8 1320 aa5.95□□□□□ -1.46
SSX2IP-208ENST00000490476 PALLDQ8WX93 1383 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 ARFGEF2Q9Y6D5 1785 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 H3BUI4 141 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 GOLIM4O00461 696 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 PHF2O75151 1096 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 ALDH1A2O94788 518 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 ENDOD1O94919 500 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 HRGP04196 525 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 CHGBP05060 677 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 IL2RBP14784 551 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 JUNBP17275 347 aaPredicted RBP5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 PEX2P28328 305 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 SERPINB3P29508 390 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 SLC6A9P48067 706 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 CACNB3P54284 484 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 TMF1P82094 1093 aa5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 MEF2AQ02078 507 aaPredicted RBP5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 TOP3AQ13472 1001 aaPredicted RBP5.94□□□□□ -1.46
SSX2IP-208ENST00000490476 EIF4HQ15056 248 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms