RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 UFL1O94874 794 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 FSBPO95073 299 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 SERPINC1P01008 464 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 SSBP05455 408 aaKnown RBP eCLIP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CTAGE8P0CG41 777 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CYP2D6P10635 497 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 FPR2P25090 351 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 TNFRSF8P28908 595 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 TM4SF1P30408 202 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 SLC6A11P48066 632 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 FNTAP49354 379 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CACNB3P54284 484 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 USP14P54578 494 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 DYNLL1P63167 89 aaKnown RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CEBPZQ03701 1054 aaKnown RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 RASGRF1Q13972 1273 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 MORC3Q14149 939 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 PLCB4Q15147 1175 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 FXNQ16595 210 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 TUBB8Q3ZCM7 444 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CFAP100Q494V2 611 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 MAP9Q49MG5 647 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 HSP90B2PQ58FF3 399 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 POMZP3Q6PJE2 187 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 SHC4Q6S5L8 630 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 RAD9BQ6WBX8 426 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 TRAPPC11Q7Z392 1133 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 ZNF572Q7Z3I7 529 aaPredicted RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CTAGE6Q86UF2 777 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 SPATS2Q86XZ4 545 aaKnown RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CTAGE4Q8IX94 777 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 NLGN1Q8N2Q7 840 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 LINC00482Q8N8I6 264 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 KBTBD3Q8NAB2 608 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 MIGA1Q8NAN2 632 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 C1orf131Q8NDD1 294 aaKnown RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 AFAP1L1Q8TED9 768 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 ZNF384Q8TF68 577 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 COG1Q8WTW3 980 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CCDC12Q8WUD4 166 aaPredicted RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 ERCC4Q92889 916 aaPredicted RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 DVL3Q92997 716 aaPredicted RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 C8orf76Q96K31 380 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 RPGRIP1Q96KN7 1286 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 MED15Q96RN5 788 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 SYT3Q9BQG1 590 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 TEX13AQ9BXU3 409 aaPredicted RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 EPN3Q9H201 632 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CXorf56Q9H5V9 222 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 PIF1Q9H611 641 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 ZSWIM4Q9H7M6 989 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 FAM204AQ9H8W3 233 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 GPR108Q9NPR9 543 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 INCENPQ9NQS7 918 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 FANCLQ9NW38 375 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 SPATA6Q9NWH7 488 aaPredicted RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 RAI14Q9P0K7 980 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 GGA2Q9UJY4 613 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 ING1Q9UK53 422 aaPredicted RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 HPCAL4Q9UM19 191 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 FZD1Q9UP38 647 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 WASF3Q9UPY6 502 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 DUSP10Q9Y6W6 482 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 ZMYM6O95789 1325 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ANO9A1A5B4 782 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 TMCO5BA8MYB1 307 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ERVV-1B6SEH8 477 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 KIF28PB7ZC32 967 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 AKR1B15C9JRZ8 316 aaPredicted RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 E7EWF7 191 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 AGPSO00116 658 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 SH2B2O14492 632 aaPredicted RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 EIF3HO15372 352 aaKnown RBP eCLIP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 FOXP2O15409 715 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 PRKAB2O43741 272 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ADCY3O60266 1144 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 DLX3O60479 287 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 MSCO60682 206 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 ERLIN2O94905 339 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 PARNO95453 639 aaKnown RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 NTRK1P04629 796 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 NAT2P11245 290 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 HSD3B2P26439 372 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 PRDX5P30044 214 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 HOXC12P31275 282 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 HNRNPH1P31943 449 aaKnown RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 MAP2K2P36507 400 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 SYKP43405 635 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 PLCD1P51178 756 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 INHBEP58166 350 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 HAND2P61296 217 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 PPP2R2AP63151 447 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 SATB1Q01826 763 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 MAP4K2Q12851 820 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 G3BP1Q13283 466 aaKnown RBP eCLIP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 IFIT5Q13325 482 aaKnown RBP3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 SERINC3Q13530 473 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 RAB33AQ14088 237 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 CCDC57Q2TAC2 916 aa3.81□□□□□ -1.8
CRNKL1-203ENST00000490258 PREPLQ4J6C6 727 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms