RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 TMEM209Q96SK2 561 aa7.54□□□□□ -1.2
TM9SF3-206ENST00000490192 RNF32Q9H0A6 362 aa7.54□□□□□ -1.2
TM9SF3-206ENST00000490192 UBN1Q9NPG3 1134 aa7.54□□□□□ -1.2
TM9SF3-206ENST00000490192 WASH6PQ9NQA3 447 aa7.54□□□□□ -1.2
TM9SF3-206ENST00000490192 BLOC1S4Q9NUP1 217 aa7.54□□□□□ -1.2
TM9SF3-206ENST00000490192 TBC1D23Q9NUY8 699 aa7.54□□□□□ -1.2
TM9SF3-206ENST00000490192 TMEM98Q9Y2Y6 226 aa7.54□□□□□ -1.2
TM9SF3-206ENST00000490192 A0A0G2JNJ9 132 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 PIP5K1BO14986 540 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 FIBPO43427 364 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 KRT9P35527 623 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 PHKA1P46020 1223 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 CTBP1Q13363 440 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 SLC44A4Q53GD3 710 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 TANGO2Q6ICL3 276 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 SULT6B1Q6IMI4 303 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 TRMT2AQ8IZ69 625 aaKnown RBP7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 GLIS1Q8NBF1 620 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 SIMC1Q8NDZ2 872 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 RUBCNQ92622 972 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 ZNF518BQ9C0D4 1074 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 KCND1Q9NSA2 647 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 GPRC5DQ9NZD1 345 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 KLHL14Q9P2G3 628 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 Q9UFV3 132 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 CDC42EP3Q9UKI2 254 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 RUVBL1Q9Y265 456 aaKnown RBP7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 SLC45A1Q9Y2W3 748 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 ACTL7AQ9Y615 435 aa7.53□□□□□ -1.2
TM9SF3-206ENST00000490192 A6NCN8 305 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 PYCARD-AS1I3L0S3 204 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 BAIAP3O94812 1187 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 C8BP07358 591 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 IL1R1P14778 569 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 CRHR1P34998 444 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 STAT5BP51692 787 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 RAB32Q13637 225 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 HABP2Q14520 560 aaPredicted RBP7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 FAM110CQ1W6H9 321 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 TMEM132EQ6IEE7 984 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 BORAQ6PGQ7 559 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 HEATR4Q86WZ0 1026 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 LILRA3Q8N6C8 439 aaPredicted RBP7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 RILPL2Q969X0 211 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 SYT3Q9BQG1 590 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 PYM1Q9BRP8 204 aaKnown RBP7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 STK31Q9BXU1 1019 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 CHST8Q9H2A9 424 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 RIC8AQ9NPQ8 531 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 NECTIN3Q9NQS3 549 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 SPATA6Q9NWH7 488 aaPredicted RBP7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 SIDT1Q9NXL6 827 aaKnown RBP7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 ZNF212Q9UDV6 495 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 ZDHHC8Q9ULC8 765 aa7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 SCAF8Q9UPN6 1271 aaKnown RBP7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 YBX2Q9Y2T7 364 aaKnown RBP7.52□□□□□ -1.21
TM9SF3-206ENST00000490192 TCAF2A6NFQ2 919 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 A6NLC8 198 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 CCER2I3L3R5 266 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 WNT10BO00744 389 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 DAPK3O43293 454 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 ITGA10O75578 1167 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 ALDH1A2O94788 518 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 ITGA5P08648 1049 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 C1QTNF9P0C862 333 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 XBP1P17861 261 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 GABRB3P28472 473 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 PTPN7P35236 360 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 TUBP50607 506 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 NOMO3P69849 1222 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 ARHGAP15Q53QZ3 475 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 C16orf54Q6UWD8 224 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 IRF2BP1Q8IU81 584 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 FTSJ3Q8IY81 847 aaKnown RBP7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 SDR16C5Q8N3Y7 309 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 VGLL2Q8N8G2 317 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 PCYOX1LQ8NBM8 494 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 CCDC150Q8NCX0 1101 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 OR56A3Q8NH54 315 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 SNRNP27Q8WVK2 155 aaKnown RBP7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 CASKIN2Q8WXE0 1202 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 ZBTB10Q96DT7 871 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 ZSWIM3Q96MP5 696 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 MAGEB5Q9BZ81 275 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.51□□□□□ -1.212e-7■■□□□ 12.5
TM9SF3-206ENST00000490192 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 RGL1Q9NZL6 768 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 KIF17Q9P2E2 1029 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 SRP68Q9UHB9 627 aaKnown RBP7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 SLC13A4Q9UKG4 626 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 AFG3L2Q9Y4W6 797 aa7.51□□□□□ -1.21
TM9SF3-206ENST00000490192 A0A0B4J269 797 aa7.5□□□□□ -1.21
TM9SF3-206ENST00000490192 TMEM233B4DJY2 109 aa7.5□□□□□ -1.21
TM9SF3-206ENST00000490192 SBK3P0C264 359 aa7.5□□□□□ -1.21
TM9SF3-206ENST00000490192 ATP1A3P13637 1013 aa7.5□□□□□ -1.21
TM9SF3-206ENST00000490192 LIFRP42702 1097 aa7.5□□□□□ -1.21
TM9SF3-206ENST00000490192 WNT3AP56704 352 aa7.5□□□□□ -1.21
TM9SF3-206ENST00000490192 ZNF200P98182 395 aaPredicted RBP7.5□□□□□ -1.21
TM9SF3-206ENST00000490192 CACNB2Q08289 660 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms