RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 ZNF148Q9UQR1 794 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 AFG3L2Q9Y4W6 797 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 BRCA2P51587 3418 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 TMEM120BA0PK00 339 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 UBA1P22314 1058 aaKnown RBP16.69■□□□□ 0.26
BRD9-208ENST00000489816 IVDP26440 423 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 MMP13P45452 471 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 RAP1GAPP47736 663 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 PSMD6Q15008 389 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 DCUN1D2Q6PH85 259 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 C6orf89Q6UWU4 347 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
BRD9-208ENST00000489816 CATSPERGQ6ZRH7 1159 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 ABRAQ8N0Z2 381 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 RNF149Q8NC42 400 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 SLC17A8Q8NDX2 589 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 ATXN2LQ8WWM7 1075 aaKnown RBP16.69■□□□□ 0.26
BRD9-208ENST00000489816 NLRP4Q96MN2 994 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 MAP3K20Q9NYL2 800 aaKnown RBP16.69■□□□□ 0.26
BRD9-208ENST00000489816 IVNS1ABPQ9Y6Y0 642 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 GAS8O95995 478 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 FDX1P10109 184 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 CD19P15391 556 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 CDH8P55286 799 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 SNRPFP62306 86 aaKnown RBP16.68■□□□□ 0.26
BRD9-208ENST00000489816 MPP2Q14168 576 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 SLMAPQ14BN4 828 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 P3H1Q32P28 736 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 PORCNQ9H237 461 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 CD248Q9HCU0 757 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 FGFR1OP2Q9NVK5 253 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 DNPEPQ9ULA0 475 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 FER1L6Q2WGJ9 1857 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 PROSCO94903 275 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 IGBP1P78318 339 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 ACTN3Q08043 901 aaPredicted RBP16.68■□□□□ 0.26
BRD9-208ENST00000489816 FASTKD3Q14CZ7 662 aaKnown RBP16.68■□□□□ 0.26
BRD9-208ENST00000489816 MFSD7Q6UXD7 560 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 PGM2Q96G03 612 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 SNF8Q96H20 258 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 PCYT2Q99447 389 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 C17orf75Q9HAS0 396 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 BTBD7Q9P203 1132 aa16.68■□□□□ 0.26
BRD9-208ENST00000489816 TCP11X1B4DZS4 312 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 POC1B-GALNT4F8VUJ3 575 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 GGPS1O95749 300 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 CLTAP09496 248 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 TCF7P36402 384 aaPredicted RBP16.67■□□□□ 0.26
BRD9-208ENST00000489816 STAT5BP51692 787 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 NRLP54845 237 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 LIN9Q5TKA1 542 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 IZUMO3Q5VZ72 239 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 MOB2Q70IA6 237 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 MAFGO15525 162 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 B4GALT5O43286 388 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 SPAG7O75391 227 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 CENPCQ03188 943 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 SLC20A2Q08357 652 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 HSDL1Q3SXM5 330 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 RHPN2Q8IUC4 686 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 COPS5Q92905 334 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 KLRG1Q96E93 195 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 ZNF317Q96PQ6 595 aaPredicted RBP16.67■□□□□ 0.26
BRD9-208ENST00000489816 ZWILCHQ9H900 591 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 LRRD1A4D1F6 860 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 PMM2O15305 246 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 OGDHQ02218 1023 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 NUGGCQ68CJ6 796 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 RHOT1Q8IXI2 618 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 TMEM192Q8IY95 271 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 EMC1Q8N766 993 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 ATL2Q8NHH9 583 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.67■□□□□ 0.26
BRD9-208ENST00000489816 MORC4Q8TE76 937 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 HVCN1Q96D96 273 aa16.67■□□□□ 0.26
BRD9-208ENST00000489816 COL11A1P12107 1806 aaPredicted RBP16.66■□□□□ 0.26
BRD9-208ENST00000489816 INO80B-WBP1J3KQ70 363 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 KRT1P04264 644 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 CYP1A1P04798 512 aaPredicted RBP16.66■□□□□ 0.26
BRD9-208ENST00000489816 CLUL1Q15846 466 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 GJC2Q5T442 439 aaPredicted RBP16.66■□□□□ 0.26
BRD9-208ENST00000489816 GPAT2Q6NUI2 795 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 PPP1R13LQ8WUF5 828 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 TFAP2BQ92481 460 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 IMPG2Q9BZV3 1241 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 INO80BQ9C086 356 aaPredicted RBP16.66■□□□□ 0.26
BRD9-208ENST00000489816 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
BRD9-208ENST00000489816 CNOT10Q9H9A5 744 aaKnown RBP16.66■□□□□ 0.26
BRD9-208ENST00000489816 NINJ2Q9NZG7 142 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 A0A0B4J269 797 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 DKC1O60832 514 aaKnown RBP eCLIP16.66■□□□□ 0.262e-7■■■■■ 49.9
BRD9-208ENST00000489816 BRAFP15056 766 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 CNGA2Q16280 664 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 FAM47EQ6ZV65 393 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 CCDC197Q8NCU1 140 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 RDM1Q8NG50 284 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 TMEM121Q9BTD3 319 aa16.66■□□□□ 0.26
BRD9-208ENST00000489816 KIF9Q9HAQ2 790 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms