RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 CGRRF1Q99675 332 aa8.49□□□□□ -1.05
SSR1-210ENST00000489567 DUSP9Q99956 384 aaKnown RBP8.49□□□□□ -1.05
SSR1-210ENST00000489567 CLSTN3Q9BQT9 956 aa8.49□□□□□ -1.05
SSR1-210ENST00000489567 UBE2ZQ9H832 354 aaPredicted RBP8.49□□□□□ -1.05
SSR1-210ENST00000489567 RXFP1Q9HBX9 757 aa8.49□□□□□ -1.05
SSR1-210ENST00000489567 CLEC1BQ9P126 229 aa8.49□□□□□ -1.05
SSR1-210ENST00000489567 STK39Q9UEW8 545 aa8.49□□□□□ -1.05
SSR1-210ENST00000489567 AGAP1Q9UPQ3 857 aa8.49□□□□□ -1.05
SSR1-210ENST00000489567 CTNND2Q9UQB3 1225 aa8.49□□□□□ -1.05
SSR1-210ENST00000489567 HCFC2Q9Y5Z7 792 aa8.49□□□□□ -1.05
SSR1-210ENST00000489567 SCN1AP35498 2009 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 M0QZQ0 153 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 TRAPPC3O43617 180 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 ZMYND10O75800 440 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 GABBR2O75899 941 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 CST3P01034 146 aaPredicted RBP8.48□□□□□ -1.05
SSR1-210ENST00000489567 TMEM191BP0C7N4 346 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 TNNI1P19237 187 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 KCNA5P22460 613 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 CCNE1P24864 410 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 STX17P56962 302 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 CLDN10P78369 228 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 BMS1Q14692 1282 aaKnown RBP8.48□□□□□ -1.05
SSR1-210ENST00000489567 SURF1Q15526 300 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 PSMD5Q16401 504 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 VARS2Q5ST30 1063 aaKnown RBP8.48□□□□□ -1.05
SSR1-210ENST00000489567 TTI2Q6NXR4 508 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 TRAPPC11Q7Z392 1133 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 ZC3H3Q8IXZ2 948 aaKnown RBP8.48□□□□□ -1.05
SSR1-210ENST00000489567 TRIML1Q8N9V2 468 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 SLC22A17Q8WUG5 538 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 CACTINQ8WUQ7 758 aaKnown RBP8.48□□□□□ -1.05
SSR1-210ENST00000489567 NELFBQ8WX92 580 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 PPP2R3CQ969Q6 453 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 ELMO3Q96BJ8 720 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 DHTKD1Q96HY7 919 aaPredicted RBP8.48□□□□□ -1.05
SSR1-210ENST00000489567 SENP8Q96LD8 212 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 FNBP1Q96RU3 617 aa8.48□□□□□ -1.05
SSR1-210ENST00000489567 C5orf42Q9H799 3197 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 PSMA7O14818 248 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TBC1D4O60343 1298 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 KRT19P08727 400 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 SPATA31D3P0C874 917 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TRIM49P0CI25 452 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TRIM49CP0CI26 452 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 KLRC2P26717 231 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 KCNQ1P51787 676 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 CLCN4P51793 760 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 LRRC63Q05C16 580 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 MRPL58Q14197 206 aaKnown RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 CLUL1Q15846 466 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 DUOXA2Q1HG44 320 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 DPCR1Q3MIW9 517 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TDRD10Q5VZ19 366 aaKnown RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 RBM43Q6ZSC3 357 aaKnown RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 SPATA31D4Q6ZUB0 917 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 PALB2Q86YC2 1186 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 FAM186BQ8IYM0 893 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 ANKRD36BP1Q96IX9 119 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 MSLNLQ96KJ4 702 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 CDCA3Q99618 268 aaPredicted RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 GTPBP4Q9BZE4 634 aaKnown RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 FNIP2Q9P278 1114 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 THEGQ9P2T0 379 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 MTRRQ9UBK8 725 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 CDH22Q9UJ99 828 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 ITGA11Q9UKX5 1188 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 PCDHB8Q9UN66 801 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 FRMD4BQ9Y2L6 1034 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 KPNA7A9QM74 516 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 SYN3O14994 580 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 MAPK13O15264 365 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TGM5O43548 720 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TNNC2P02585 160 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 C4BPAP04003 597 aaKnown RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 RPL13P26373 211 aaKnown RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 PSMC2P35998 433 aaKnown RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 NDUFV1P49821 464 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TAF6P49848 677 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 VAMP7P51809 220 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 RBP5P82980 135 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 FKBP3Q00688 224 aaKnown RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 PPP3CAQ08209 521 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 STIM1Q13586 685 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 SYCE2Q6PIF2 218 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 DSTYKQ6XUX3 929 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TMEM184AQ6ZMB5 413 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 GPR65Q8IYL9 337 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 C12orf76Q8N812 135 aaPredicted RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.47□□□□□ -1.05
SSR1-210ENST00000489567 TMC2Q8TDI7 906 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TSG101Q99816 390 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 APOL5Q9BWW9 433 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 EMILIN2Q9BXX0 1053 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 TMEM63CQ9P1W3 806 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 COG5Q9UP83 839 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 SSX2IPQ9Y2D8 614 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 CDY1Q9Y6F8 540 aa8.47□□□□□ -1.05
SSR1-210ENST00000489567 PLXNA3P51805 1871 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms