RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 CYP26A1O43174 497 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 CCP110O43303 1012 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 ZSCAN12O43309 604 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 CCDC175P0C221 793 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 EN2P19622 333 aaPredicted RBP22.38■■□□□ 1.17
SND1-214ENST00000489417 LRPAP1P30533 357 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 CLCN1P35523 988 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 AFF1P51825 1210 aaKnown RBP22.38■■□□□ 1.17
SND1-214ENST00000489417 YWHAEP62258 255 aaKnown RBP22.38■■□□□ 1.17
SND1-214ENST00000489417 TCTN1Q2MV58 587 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 ZNF560Q96MR9 790 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 BCO2Q9BYV7 579 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 GOLGA2P5Q9HBQ8 144 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 TRMT1Q9NXH9 659 aaKnown RBP22.38■■□□□ 1.17
SND1-214ENST00000489417 CNTN6Q9UQ52 1028 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 USP27XA6NNY8 438 aa22.37■■□□□ 1.17
SND1-214ENST00000489417 INPPL1O15357 1258 aa22.37■■□□□ 1.17
SND1-214ENST00000489417 ZNF500O60304 480 aaPredicted RBP22.37■■□□□ 1.17
SND1-214ENST00000489417 IPO7O95373 1038 aaKnown RBP22.37■■□□□ 1.17
SND1-214ENST00000489417 RFC2P35250 354 aa22.37■■□□□ 1.17
SND1-214ENST00000489417 TNNC1P63316 161 aa22.37■■□□□ 1.17
SND1-214ENST00000489417 UBE2Q1Q7Z7E8 422 aa22.37■■□□□ 1.17
SND1-214ENST00000489417 VPS36Q86VN1 386 aa22.37■■□□□ 1.17
SND1-214ENST00000489417 ELAC1Q9H777 363 aaKnown RBP22.37■■□□□ 1.17
SND1-214ENST00000489417 TMEM161AQ9NX61 479 aa22.37■■□□□ 1.17
SND1-214ENST00000489417 REXO2Q9Y3B8 237 aaKnown RBP22.37■■□□□ 1.17
SND1-214ENST00000489417 KIAA0355O15063 1070 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 LCA5LO95447 670 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 PNPLA4P41247 253 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 KRT83P78385 493 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 GRIK3Q13003 919 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 SPA17Q15506 151 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 NAB2Q15742 525 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 DEFB128Q7Z7B8 93 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 RBBP8NLQ8NC74 664 aaPredicted RBP22.36■■□□□ 1.17
SND1-214ENST00000489417 SYT11Q9BT88 431 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.36■■□□□ 1.17
SND1-214ENST00000489417 CYP3A43Q9HB55 503 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 PRDM5Q9NQX1 630 aaPredicted RBP22.36■■□□□ 1.17
SND1-214ENST00000489417 CISHQ9NSE2 258 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 INPP5FQ9Y2H2 1132 aa22.36■■□□□ 1.17
SND1-214ENST00000489417 SCN5AQ14524 2016 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 TIMP1P01033 207 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 WEE2P0C1S8 567 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 CD58P19256 250 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 BPIFB4P59827 614 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 GFPT1Q06210 699 aaPredicted RBP22.35■■□□□ 1.17
SND1-214ENST00000489417 SLC18A3Q16572 532 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 TMEM270Q6UE05 265 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 GLB1LQ6UWU2 654 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 SLC47A2Q86VL8 602 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 EPS8L1Q8TE68 723 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 PPP1R13BQ96KQ4 1090 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 AGPAT1Q99943 283 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 SMYD3Q9H7B4 428 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 BRCA2P51587 3418 aa22.35■■□□□ 1.17
SND1-214ENST00000489417 A0A087X0T9 212 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 TRIM43BA6NCK2 446 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 ZNF263O14978 683 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 POMCP01189 267 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 FAM228BP0C875 321 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 RAP1GAPP47736 663 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 TAF6P49848 677 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 PDE6CP51160 858 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 CYP27A1Q02318 531 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 BMS1Q14692 1282 aaKnown RBP22.34■■□□□ 1.17
SND1-214ENST00000489417 SV2CQ496J9 727 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 NOP9Q86U38 636 aaKnown RBP22.34■■□□□ 1.17
SND1-214ENST00000489417 REXO1L1PQ8IX06 675 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 OLIG1Q8TAK6 271 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 SLC20A1Q8WUM9 679 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 TRIM43Q96BQ3 446 aaPredicted RBP22.34■■□□□ 1.17
SND1-214ENST00000489417 SDCBP2Q9H190 292 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 ADAMTS1Q9UHI8 967 aa22.34■■□□□ 1.17
SND1-214ENST00000489417 NOCTQ9UK39 431 aaKnown RBP22.34■■□□□ 1.17
SND1-214ENST00000489417 CYP11B1P15538 503 aa22.33■■□□□ 1.17
SND1-214ENST00000489417 TNFAIP3P21580 790 aa22.33■■□□□ 1.17
SND1-214ENST00000489417 ZNF132P52740 706 aa22.33■■□□□ 1.17
SND1-214ENST00000489417 CLLU1OSQ5K130 101 aa22.33■■□□□ 1.17
SND1-214ENST00000489417 CNKSR3Q6P9H4 555 aa22.33■■□□□ 1.17
SND1-214ENST00000489417 LNX1Q8TBB1 728 aaPredicted RBP22.33■■□□□ 1.17
SND1-214ENST00000489417 URGCPQ8TCY9 931 aa22.33■■□□□ 1.17
SND1-214ENST00000489417 ACP6Q9NPH0 428 aa22.33■■□□□ 1.17
SND1-214ENST00000489417 PCDHB7Q9Y5E2 793 aa22.33■■□□□ 1.17
SND1-214ENST00000489417 SNX9Q9Y5X1 595 aa22.33■■□□□ 1.17
SND1-214ENST00000489417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.32■■□□□ 1.16
SND1-214ENST00000489417 GOLGA6L9A6NEM1 432 aa22.32■■□□□ 1.16
SND1-214ENST00000489417 DDX3XO00571 662 aaKnown RBP eCLIP22.32■■□□□ 1.16
SND1-214ENST00000489417 FGFR1P11362 822 aa22.32■■□□□ 1.16
SND1-214ENST00000489417 RAG1P15918 1043 aa22.32■■□□□ 1.16
SND1-214ENST00000489417 RPL9P32969 192 aaKnown RBP22.32■■□□□ 1.16
SND1-214ENST00000489417 CDH8P55286 799 aa22.32■■□□□ 1.16
SND1-214ENST00000489417 RPUSD2Q8IZ73 545 aaKnown RBP22.32■■□□□ 1.16
SND1-214ENST00000489417 MMS19Q96T76 1030 aa22.32■■□□□ 1.16
SND1-214ENST00000489417 FAM124BQ9H5Z6 455 aaPredicted RBP22.32■■□□□ 1.16
SND1-214ENST00000489417 LRFN2Q9ULH4 789 aa22.32■■□□□ 1.16
SND1-214ENST00000489417 KPNA7A9QM74 516 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 PODXLO00592 558 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 MAGEA1P43355 309 aa22.31■■□□□ 1.16
SND1-214ENST00000489417 TUSC3Q13454 348 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms