RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PSMD5Q16401 504 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 CRY1Q16526 586 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 QRICH1Q2TAL8 776 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 TWF2Q6IBS0 349 aaKnown RBP8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 FBXL19Q6PCT2 694 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 CCDC81Q6ZN84 652 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 SAMD3Q8N6K7 520 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 MIB2Q96AX9 1013 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 TMEM47Q9BQJ4 181 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 FAM124BQ9H5Z6 455 aaPredicted RBP8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 RSAD1Q9HA92 442 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 SUSD2Q9UGT4 822 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 COL1A2P08123 1366 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 ZNF469Q96JG9 3925 aaPredicted RBP8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 A0A087X0B3 334 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 OTOL1A6NHN0 477 aaPredicted RBP8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 DXOO77932 396 aaKnown RBP8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 HNRNPLP14866 589 aaKnown RBP eCLIP8.46□□□□□ -1.061e-7■■□□□ 14
EXOSC3-206ENST00000489414 GJA1P17302 382 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 GALK1P51570 392 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 ERVPABLB-1P60509 514 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 SPIRE1Q08AE8 756 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 DCAF6Q58WW2 860 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 FHL5Q5TD97 284 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 NAIF1Q69YI7 327 aaPredicted RBP8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 PTRH1Q86Y79 214 aaKnown RBP8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 CACTIN-AS1Q8N1I8 211 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 ENGASEQ8NFI3 743 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 SPATA3Q8NHX4 192 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 PTCD2Q8WV60 388 aaKnown RBP8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 PGBD4Q96DM1 585 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 MDFIQ99750 246 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 GPR88Q9GZN0 384 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 UBA5Q9GZZ9 404 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 CUEDC1Q9NWM3 386 aaPredicted RBP8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 ADAM28Q9UKQ2 775 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 RBM19Q9Y4C8 960 aaKnown RBP8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 CNTNAP2Q9UHC6 1331 aa8.46□□□□□ -1.06
EXOSC3-206ENST00000489414 HBP1O60381 514 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 RFPL3O75679 317 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 BCAR3O75815 825 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 FAM155BO75949 473 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 ALDH1A2O94788 518 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 GOLGA8HP0CJ92 632 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 GNSP15586 552 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 MATKP42679 507 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 GRK6P43250 576 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 TDO2P48775 406 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 STAT5BP51692 787 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 TEAD2Q15562 447 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 PROX2Q3B8N5 592 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 GPATCH4Q5T3I0 446 aaKnown RBP8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 CYP4A22Q5TCH4 519 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 SPNS3Q6ZMD2 512 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 CENPQQ7L2Z9 268 aaPredicted RBP8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 FCHSD1Q86WN1 690 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 TTC30AQ86WT1 665 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 ADGRF4Q8IZF3 695 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 PIGOQ8TEQ8 1089 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 FRAT1Q92837 279 aaPredicted RBP8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 HSPA12BQ96MM6 686 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 P2RY13Q9BPV8 354 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 COLEC11Q9BWP8 271 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 SLITRK6Q9H5Y7 841 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 OBP2AQ9NY56 170 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 DONSONQ9NYP3 566 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 MMP17Q9ULZ9 603 aa8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.45□□□□□ -1.06
EXOSC3-206ENST00000489414 COL6A5A8TX70 2615 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 GNAI3P08754 354 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 C1SP09871 688 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 U2AF2P26368 475 aaKnown RBP eCLIP8.44□□□□□ -1.065e-10■■■■■ 27.4
EXOSC3-206ENST00000489414 SLC26A2P50443 739 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 SKOR1P84550 965 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 BNC1Q01954 994 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 SUZ12Q15022 739 aaKnown RBP8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 TESK1Q15569 626 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 HLA-BQ31612 363 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 IL27RAQ6UWB1 636 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 SLC36A4Q6YBV0 504 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 ATCAYQ86WG3 371 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 HS6ST3Q8IZP7 471 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 METTL13Q8N6R0 699 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 TRIML1Q8N9V2 468 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 USP33Q8TEY7 942 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 ZNF668Q96K58 619 aaPredicted RBP8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 AMNQ9BXJ7 453 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 HPS4Q9NQG7 708 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 GEMIN8Q9NWZ8 242 aaKnown RBP8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 FTSJ1Q9UET6 329 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 PCDHB2Q9Y5E7 798 aa8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 SF3B1O75533 1304 aaKnown RBP eCLIP8.44□□□□□ -1.06
EXOSC3-206ENST00000489414 TMEM131Q92545 1883 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 IPO8O15397 1037 aaKnown RBP8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 SEMA7AO75326 666 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 NR1I2O75469 434 aa8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 CSDE1O75534 798 aaKnown RBP8.43□□□□□ -1.06
EXOSC3-206ENST00000489414 OR1D2P34982 312 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms