RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ZNF844Q08AG5 666 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 MALLQ13021 153 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 DYRK1AQ13627 763 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 TKFCQ3LXA3 575 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 CD300EQ496F6 205 aaPredicted RBP3.92□□□□□ -1.78
CCDC93-209ENST00000488908 DACT2Q5SW24 774 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 TECPR1Q7Z6L1 1165 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 B3GALNT2Q8NCR0 500 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 CLRN3Q8NCR9 226 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 LEO1Q8WVC0 666 aaPredicted RBP3.92□□□□□ -1.78
CCDC93-209ENST00000488908 APPBP2Q92624 585 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 USP7Q93009 1102 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 ZSWIM4Q9H7M6 989 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 KLC4Q9NSK0 619 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 CDYLQ9Y232 598 aa3.92□□□□□ -1.78
CCDC93-209ENST00000488908 WDR27A2RRH5 827 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 PPP3CBP16298 524 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 TKTP29401 623 aaKnown RBP3.91□□□□□ -1.78
CCDC93-209ENST00000488908 SLC6A9P48067 706 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 POLGP54098 1239 aaPredicted RBP3.91□□□□□ -1.78
CCDC93-209ENST00000488908 MGAT2Q10469 447 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 RUSC1-AS1Q66K80 236 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 YTHDF3Q7Z739 585 aaKnown RBP3.91□□□□□ -1.78
CCDC93-209ENST00000488908 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC93-209ENST00000488908 SNX19Q92543 992 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 MFSD3Q96ES6 412 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 PBKQ96KB5 322 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 TLR10Q9BXR5 811 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 MANSC1Q9H8J5 431 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 ANLNQ9NQW6 1124 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 PLAAQ9Y263 795 aa3.91□□□□□ -1.78
CCDC93-209ENST00000488908 FAM171A2A8MVW0 826 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 TARM1B6A8C7 271 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 PPEF2O14830 753 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 AMY1AP04745 511 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 HNRNPCP07910 306 aaKnown RBP eCLIP3.9□□□□□ -1.79
CCDC93-209ENST00000488908 GSPT1P15170 499 aaKnown RBP3.9□□□□□ -1.79
CCDC93-209ENST00000488908 BPIP17213 487 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 DDCP20711 480 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 CCT8P50990 548 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 ANXA11P50995 505 aaKnown RBP3.9□□□□□ -1.79
CCDC93-209ENST00000488908 SEPT2Q15019 361 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 AWAT2Q6E213 333 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 KCNK18Q7Z418 384 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 ADGRG5Q8IZF4 528 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 CAMKK1Q8N5S9 505 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 TGFBRAP1Q8WUH2 860 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 C11orf54Q9H0W9 315 aaPredicted RBP3.9□□□□□ -1.79
CCDC93-209ENST00000488908 CTTNBP2NLQ9P2B4 639 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 SERGEFQ9UGK8 458 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 ZNF580Q9UK33 172 aa3.9□□□□□ -1.79
CCDC93-209ENST00000488908 CCDC195A0A1B0GUA6 201 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 GOLGA8AA7E2F4 631 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 VWC2LB2RUY7 222 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 H3BNC9 293 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 NEMP1O14524 444 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 TOR1BO14657 336 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 INSIG1O15503 277 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 DRD4P21917 467 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 MPGP29372 298 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 ATP8B2P98198 1209 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 RAPGEF1Q13905 1077 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 HLXQ14774 488 aaPredicted RBP3.89□□□□□ -1.79
CCDC93-209ENST00000488908 SLC18B1Q6NT16 456 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 ZNF66Q6ZN08 573 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 ZGPATQ8N5A5 531 aaKnown RBP3.89□□□□□ -1.79
CCDC93-209ENST00000488908 RNPC3Q96LT9 517 aaKnown RBP3.89□□□□□ -1.79
CCDC93-209ENST00000488908 ALG8Q9BVK2 526 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 IFT22Q9H7X7 185 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 FANCLQ9NW38 375 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 PCDHB1Q9Y5F3 818 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 NR2E3Q9Y5X4 410 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 MYBBP1AQ9BQG0 1328 aaKnown RBP3.89□□□□□ -1.79
CCDC93-209ENST00000488908 CACNA1IQ9P0X4 2223 aa3.89□□□□□ -1.79
CCDC93-209ENST00000488908 PPP6CO00743 305 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 ZEB2O60315 1214 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 SUN1O94901 812 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 AGFG2O95081 481 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 SNHG28P0DPA3 235 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 MMP13P45452 471 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 PLCD1P51178 756 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 SLC5A3P53794 718 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 LAMB3Q13751 1172 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 DHCR24Q15392 516 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 PLAC9Q5JTB6 97 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 TOR2AQ5JU69 321 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 LMBR1Q8WVP7 490 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 HMCESQ96FZ2 354 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 ORAI2Q96SN7 254 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 TTC1Q99614 292 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 ELOVL5Q9NYP7 299 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 ADGRA2Q96PE1 1338 aa3.88□□□□□ -1.79
CCDC93-209ENST00000488908 TOP3BO95985 862 aaKnown RBP3.87□□□□□ -1.79
CCDC93-209ENST00000488908 EBLN1P0CF75 366 aa3.87□□□□□ -1.79
CCDC93-209ENST00000488908 NR2F6P10588 404 aa3.87□□□□□ -1.79
CCDC93-209ENST00000488908 CYP2D6P10635 497 aa3.87□□□□□ -1.79
CCDC93-209ENST00000488908 HNRNPMP52272 730 aaKnown RBP eCLIP3.87□□□□□ -1.79
CCDC93-209ENST00000488908 CTXN1P60606 82 aa3.87□□□□□ -1.79
CCDC93-209ENST00000488908 PIGFQ07326 219 aa3.87□□□□□ -1.79
CCDC93-209ENST00000488908 PROSER3Q2NL68 480 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms