RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 HNRNPDLO14979 420 aaKnown RBP20.05■□□□□ 0.8
HDAC6-231ENST00000488905 SLC26A4O43511 780 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 FAM189A1O60320 539 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 CYP3A5P20815 502 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 MARCKSP29966 332 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-231ENST00000488905 AARSP49588 968 aaKnown RBP eCLIP20.05■□□□□ 0.8
HDAC6-231ENST00000488905 LIG4P49917 911 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 HAUS6Q7Z4H7 955 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 HS6ST3Q8IZP7 471 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 LEMD2Q8NC56 503 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 BEST2Q8NFU1 509 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 RUBCNQ92622 972 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 AK8Q96MA6 479 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 ZNF512Q96ME7 567 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-231ENST00000488905 NELL2Q99435 816 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 BRD9Q9H8M2 597 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 MRPS17Q9Y2R5 130 aaKnown RBP20.05■□□□□ 0.8
HDAC6-231ENST00000488905 YIPF1Q9Y548 306 aa20.05■□□□□ 0.8
HDAC6-231ENST00000488905 SHISA7A6NL88 538 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 K7ENM7 598 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 SPTLC1O15269 473 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 NCAM2O15394 837 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 MOSPD3O75425 235 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 OAZ2O95190 189 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 CD2BP2O95400 341 aaKnown RBP20.04■□□□□ 0.8
HDAC6-231ENST00000488905 RPS9P46781 194 aaKnown RBP20.04■□□□□ 0.8
HDAC6-231ENST00000488905 EPHA5P54756 1037 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 ZBTB6Q15916 424 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 KYAT1Q16773 422 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 GPBP1Q86WP2 473 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 KIAA2013Q8IYS2 634 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 SUMF1Q8NBK3 374 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 LRRC15Q8TF66 581 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 SMARCD2Q92925 531 aa20.04■□□□□ 0.8
HDAC6-231ENST00000488905 TRMT61BQ9BVS5 477 aaKnown RBP20.04■□□□□ 0.8
HDAC6-231ENST00000488905 OXCT2Q9BYC2 517 aaPredicted RBP20.04■□□□□ 0.8
HDAC6-231ENST00000488905 TIMM13Q9Y5L4 95 aaPredicted RBP20.04■□□□□ 0.8
HDAC6-231ENST00000488905 XPOTO43592 962 aaKnown RBP20.03■□□□□ 0.8
HDAC6-231ENST00000488905 VNN2O95498 520 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 PIGRP01833 764 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 MYL4P12829 197 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 SCP2P22307 547 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 GUCY2FP51841 1108 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 CSTF1Q05048 431 aaKnown RBP20.03■□□□□ 0.8
HDAC6-231ENST00000488905 ENOX2Q16206 610 aaKnown RBP20.03■□□□□ 0.8
HDAC6-231ENST00000488905 VITQ6UXI7 678 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 CALML4Q96GE6 196 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 ZSWIM3Q96MP5 696 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 TBX20Q9UMR3 447 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 PCDHGA2Q9Y5H1 932 aa20.03■□□□□ 0.8
HDAC6-231ENST00000488905 DENND4CQ5VZ89 1909 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 LACTBL1A8MY62 500 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 OGTO15294 1046 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 FAM13AO94988 1023 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 OR4Q2P0C623 313 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 GJA1P17302 382 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 PSMC3P17980 439 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 UBA7P41226 1012 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 ZNF131P52739 623 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 PLD1Q13393 1074 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 USP37Q86T82 979 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 DEPDC1BQ8WUY9 529 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 IRF7Q92985 503 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 BORCS6Q96GS4 357 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 PGLYRP2Q96PD5 576 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 RPF1Q9H9Y2 349 aaKnown RBP20.02■□□□□ 0.8
HDAC6-231ENST00000488905 PARVGQ9HBI0 331 aa20.02■□□□□ 0.8
HDAC6-231ENST00000488905 PRMT8Q9NR22 394 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-231ENST00000488905 KIF26AQ9ULI4 1882 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-231ENST00000488905 NCANO14594 1321 aa20.02■□□□□ 0.79
HDAC6-231ENST00000488905 OR6C75A6NL08 312 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 MAN2B1O00754 1011 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 GDI1P31150 447 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 FZD5Q13467 585 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 DHX8Q14562 1220 aaKnown RBP20.01■□□□□ 0.79
HDAC6-231ENST00000488905 TEAD2Q15562 447 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 DSTYKQ6XUX3 929 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 TMC8Q8IU68 726 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 MAP4K3Q8IVH8 894 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 ZNF687Q8N1G0 1237 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 MYCT1Q8N699 235 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 SHKBP1Q8TBC3 707 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 ZSCAN18Q8TBC5 510 aaPredicted RBP20.01■□□□□ 0.79
HDAC6-231ENST00000488905 RMDN1Q96DB5 314 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 TSPAN18Q96SJ8 248 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 MSTO1Q9BUK6 570 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 CRISPLD1Q9H336 500 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 SLITRK6Q9H5Y7 841 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 TRPV4Q9HBA0 871 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 ZNF334Q9HCZ1 680 aaPredicted RBP20.01■□□□□ 0.79
HDAC6-231ENST00000488905 BLOC1S4Q9NUP1 217 aa20.01■□□□□ 0.79
HDAC6-231ENST00000488905 NDRG2Q9UN36 371 aaKnown RBP20.01■□□□□ 0.79
HDAC6-231ENST00000488905 PPEF2O14830 753 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 ADRB2P07550 413 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 ODC1P11926 461 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 PLCG1P19174 1290 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 TYMPP19971 482 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 VIPR2P41587 438 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 GPR17Q13304 367 aa20■□□□□ 0.79
HDAC6-231ENST00000488905 SPATA1Q5VX52 437 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms