RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 MSTO1Q9BUK6 570 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 CYP39A1Q9NYL5 469 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 TRIM33Q9UPN9 1127 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 EXTL3O43909 919 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 PTPRAP18433 802 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 RAP1GAPP47736 663 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 CLDN10P78369 228 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 OGDHQ02218 1023 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 MAMLD1Q13495 774 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 WDR44Q5JSH3 913 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 KCNT1Q5JUK3 1230 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 VSTM1Q6UX27 236 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 MON1BQ7L1V2 547 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 RBBP8NLQ8NC74 664 aaPredicted RBP13.47□□□□□ -0.25
CLIC4-202ENST00000488683 IFT74Q96LB3 600 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 ANAPC5Q9UJX4 755 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 AGAP1Q9UPQ3 857 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 CYP1A1P04798 512 aaPredicted RBP13.47□□□□□ -0.25
CLIC4-202ENST00000488683 CENPCQ03188 943 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 SLMAPQ14BN4 828 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 FAM47EQ6ZV65 393 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 CEP120Q8N960 986 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 C3orf20Q8ND61 904 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 CCT6BQ92526 530 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 CEP89Q96ST8 783 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 TCHPQ9BT92 498 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 MTMR12Q9C0I1 747 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 VPS33BQ9H267 617 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 C12orf65Q9H3J6 166 aaKnown RBP13.47□□□□□ -0.25
CLIC4-202ENST00000488683 KLC4Q9NSK0 619 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 NINJ2Q9NZG7 142 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 DNPEPQ9ULA0 475 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 PCDHB2Q9Y5E7 798 aa13.47□□□□□ -0.25
CLIC4-202ENST00000488683 K7ERI5 159 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 NFKBIEO00221 500 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 ATF2P15336 505 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 GBP1P32455 592 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 RTP1P59025 263 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 CUL2Q13617 745 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 PSMD6Q15008 389 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 P3H1Q32P28 736 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 C6orf118Q5T5N4 469 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 XRRA1Q6P2D8 792 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 USP37Q86T82 979 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 FAM228AQ86W67 206 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 KIF2BQ8N4N8 673 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 ZNF280CQ8ND82 737 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 SLCO2A1Q92959 643 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 CENPTQ96BT3 561 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 MCEEQ96PE7 176 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 EFCC1Q9HA90 598 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 AVENQ9NQS1 362 aaPredicted RBP13.46□□□□□ -0.25
CLIC4-202ENST00000488683 PNMA3Q9UL41 463 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.25
CLIC4-202ENST00000488683 KAT6AQ92794 2004 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 GSTTP1A0A1W2PQM5 241 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 MAFGO15525 162 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 ZC3H11AO75152 810 aaKnown RBP eCLIP13.46□□□□□ -0.26
CLIC4-202ENST00000488683 AGTP01019 485 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 NOMO3P69849 1222 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 NOP14P78316 857 aaKnown RBP13.46□□□□□ -0.26
CLIC4-202ENST00000488683 ZNF252P-AS1Q0IIN9 211 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 LY6KQ17RY6 165 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 IZUMO3Q5VZ72 239 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 ENOSF1Q7L5Y1 443 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 DPH6Q7L8W6 267 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 TBC1D1Q86TI0 1168 aaPredicted RBP13.46□□□□□ -0.26
CLIC4-202ENST00000488683 SCYL3Q8IZE3 742 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 DEPTORQ8TB45 409 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 TMEM109Q9BVC6 243 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 TAOK3Q9H2K8 898 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 AFG3L2Q9Y4W6 797 aa13.46□□□□□ -0.26
CLIC4-202ENST00000488683 SIP14410 1827 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 POC1B-GALNT4F8VUJ3 575 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 IFNB1P01574 187 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 MYL6P60660 151 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 STRN3Q13033 797 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 KLF1Q13351 362 aaPredicted RBP13.45□□□□□ -0.26
CLIC4-202ENST00000488683 TMED2Q15363 201 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 TREML2Q5T2D2 321 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 NUGGCQ68CJ6 796 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 MFSD7Q6UXD7 560 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 CEP57Q86XR8 500 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 ANKMY2Q8IV38 441 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 CCDC197Q8NCU1 140 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 TRPM4Q8TD43 1214 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 SNF8Q96H20 258 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 OSBPL8Q9BZF1 889 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 WHRNQ9P202 907 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 ADAMTS5Q9UNA0 930 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 NFASCO94856 1347 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 A8MUI8 341 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 SPATA31C2B4DYI2 1134 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 PROSCO94903 275 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 SUPT20HL2P0C7V6 817 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 SUPT20HL1Q3ZLR7 823 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 RAB6CQ53S08 254 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
CLIC4-202ENST00000488683 TMEM192Q8IY95 271 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms