RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 MEA1Q16626 185 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 HS1BP3Q53T59 392 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 ZNF667Q5HYK9 610 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 NOMO2Q5JPE7 1267 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 ENOSF1Q7L5Y1 443 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 IRF2BP2Q7Z5L9 587 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 NPAS4Q8IUM7 802 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 LRRC52Q8N7C0 313 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 FAM81BQ96LP2 452 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 CHP1Q99653 195 aa16.24■□□□□ 0.19
CTNS-206ENST00000488623 NUCKS1Q9H1E3 243 aaKnown RBP16.24■□□□□ 0.19
CTNS-206ENST00000488623 NXF1Q9UBU9 619 aaKnown RBP16.24■□□□□ 0.19
CTNS-206ENST00000488623 R3HCC1Q9Y3T6 440 aaKnown RBP16.24■□□□□ 0.19
CTNS-206ENST00000488623 DDHD2O94830 711 aa16.23■□□□□ 0.19
CTNS-206ENST00000488623 SKILP12757 684 aa16.23■□□□□ 0.19
CTNS-206ENST00000488623 ACO1P21399 889 aaKnown RBP16.23■□□□□ 0.19
CTNS-206ENST00000488623 TBXAS1P24557 533 aaPredicted RBP16.23■□□□□ 0.19
CTNS-206ENST00000488623 PPIGQ13427 754 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTNS-206ENST00000488623 TSR1Q2NL82 804 aaKnown RBP16.23■□□□□ 0.19
CTNS-206ENST00000488623 WDR72Q3MJ13 1102 aa16.23■□□□□ 0.19
CTNS-206ENST00000488623 ZNF280BQ86YH2 543 aa16.23■□□□□ 0.19
CTNS-206ENST00000488623 UBR7Q8N806 425 aa16.23■□□□□ 0.19
CTNS-206ENST00000488623 URGCPQ8TCY9 931 aa16.23■□□□□ 0.19
CTNS-206ENST00000488623 SHC3Q92529 594 aa16.23■□□□□ 0.19
CTNS-206ENST00000488623 BAG1Q99933 345 aaPredicted RBP16.23■□□□□ 0.19
CTNS-206ENST00000488623 NIF3L1Q9GZT8 377 aa16.23■□□□□ 0.19
CTNS-206ENST00000488623 KANSL3Q9P2N6 904 aa16.23■□□□□ 0.19
CTNS-206ENST00000488623 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTNS-206ENST00000488623 CASTOR2A6NHX0 329 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 SPTLC1O15269 473 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 GFPT2O94808 682 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 CLSTN1O94985 981 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 UPP2O95045 317 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 RPL9P32969 192 aaKnown RBP16.22■□□□□ 0.19
CTNS-206ENST00000488623 ASPAP45381 313 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 CLCNKBP51801 687 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 EPHB4P54760 987 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 CDK17Q00537 523 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 ARID5AQ03989 594 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 FPGSQ05932 587 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 MYO1EQ12965 1108 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 TUSC3Q13454 348 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 ASIC2Q16515 512 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 FAM71AQ8IYT1 594 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 RABGGTAQ92696 567 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 TOP1MTQ969P6 601 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 JAKMIP2Q96AA8 810 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 TRIM44Q96DX7 344 aaPredicted RBP16.22■□□□□ 0.19
CTNS-206ENST00000488623 FAXDC2Q96IV6 333 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 PAAF1Q9BRP4 392 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 BCO2Q9BYV7 579 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 UBE2OQ9C0C9 1292 aaKnown RBP16.22■□□□□ 0.19
CTNS-206ENST00000488623 SDCBP2Q9H190 292 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 TBC1D13Q9NVG8 400 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 ZNHIT6Q9NWK9 470 aaKnown RBP16.22■□□□□ 0.19
CTNS-206ENST00000488623 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.22■□□□□ 0.19
CTNS-206ENST00000488623 LAMA3Q16787 3333 aa16.22■□□□□ 0.19
CTNS-206ENST00000488623 FNDC1Q4ZHG4 1894 aaPredicted RBP16.21■□□□□ 0.19
CTNS-206ENST00000488623 PODXLO00592 558 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 HOXA2O43364 376 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 B4GALT3O60512 393 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 FGBP02675 491 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 PLEKP08567 350 aaPredicted RBP16.21■□□□□ 0.19
CTNS-206ENST00000488623 WEE2P0C1S8 567 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 FERP16591 822 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 CLCN1P35523 988 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 USP8P40818 1118 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 CDH8P55286 799 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 LILRA4P59901 499 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 WDR5P61964 334 aaKnown RBP16.21■□□□□ 0.19
CTNS-206ENST00000488623 DEFB103AP81534 67 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 DSC1Q08554 894 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 UPP1Q16831 310 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 HGSNATQ68CP4 663 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 CD300LGQ6UXG3 332 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 CYP26C1Q6V0L0 522 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 SCARA5Q6ZMJ2 495 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 ZNF365Q70YC5 407 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 TMTC1Q8IUR5 882 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 COLGALT2Q8IYK4 626 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 CCDC112Q8NEF3 446 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 DDX27Q96GQ7 796 aaKnown RBP16.21■□□□□ 0.19
CTNS-206ENST00000488623 SMYD3Q9H7B4 428 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 ARHGAP20Q9P2F6 1191 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 CNTN6Q9UQ52 1028 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 PCDHB4Q9Y5E5 795 aa16.21■□□□□ 0.19
CTNS-206ENST00000488623 TBKBP1A7MCY6 615 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 KPNA7A9QM74 516 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 SOX1O00570 391 aaPredicted RBP16.2■□□□□ 0.18
CTNS-206ENST00000488623 CYP26A1O43174 497 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 EFCAB14O75071 495 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 BAIAP3O94812 1187 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 AMHP03971 560 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 SERPING1P05155 500 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 PNPLA4P41247 253 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 PRKCIP41743 596 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 RAP1GAPP47736 663 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 TAF6P49848 677 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 TNNC1P63316 161 aa16.2■□□□□ 0.18
CTNS-206ENST00000488623 TMEM240Q5SV17 173 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms