RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 RIN2Q8WYP3 895 aaPredicted RBP13.12□□□□□ -0.31
COL1A2-210ENST00000488298 C18orf25Q96B23 403 aaPredicted RBP13.12□□□□□ -0.31
COL1A2-210ENST00000488298 ZNF707Q96C28 371 aaPredicted RBP13.12□□□□□ -0.31
COL1A2-210ENST00000488298 B3GALT6Q96L58 329 aa13.12□□□□□ -0.31
COL1A2-210ENST00000488298 PYM1Q9BRP8 204 aaKnown RBP13.12□□□□□ -0.31
COL1A2-210ENST00000488298 PRKD2Q9BZL6 878 aa13.12□□□□□ -0.31
COL1A2-210ENST00000488298 BLZF1Q9H2G9 400 aa13.12□□□□□ -0.31
COL1A2-210ENST00000488298 PLEKHA5Q9HAU0 1116 aa13.12□□□□□ -0.31
COL1A2-210ENST00000488298 TOPORSQ9NS56 1045 aaPredicted RBP13.12□□□□□ -0.31
COL1A2-210ENST00000488298 ZDHHC7Q9NXF8 308 aa13.12□□□□□ -0.31
COL1A2-210ENST00000488298 USP25Q9UHP3 1055 aa13.12□□□□□ -0.31
COL1A2-210ENST00000488298 LACTBL1A8MY62 500 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 EIF3DO15371 548 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL1A2-210ENST00000488298 TGFB1I1O43294 461 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 PRPF6O94906 941 aaKnown RBP13.11□□□□□ -0.31
COL1A2-210ENST00000488298 GCNT3O95395 438 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 PAPLNO95428 1278 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 HARSP12081 509 aaKnown RBP13.11□□□□□ -0.31
COL1A2-210ENST00000488298 LAMP2P13473 410 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 AFMP43652 599 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 ID4P47928 161 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 WNT7BP56706 349 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 ASIC1P78348 528 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 CREMQ03060 361 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
COL1A2-210ENST00000488298 ALCAMQ13740 583 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 BMT2Q1RMZ1 405 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 GET4Q7L5D6 327 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-210ENST00000488298 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
COL1A2-210ENST00000488298 SCFD1Q8WVM8 642 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 BICD1Q96G01 975 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 ACCSQ96QU6 501 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 SEMA4AQ9H3S1 761 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 TBC1D17Q9HA65 648 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 DOCK6Q96HP0 2047 aa13.11□□□□□ -0.31
COL1A2-210ENST00000488298 RIF1Q5UIP0 2472 aaKnown RBP13.11□□□□□ -0.31
COL1A2-210ENST00000488298 RPL17P18621 184 aaKnown RBP13.1□□□□□ -0.31
COL1A2-210ENST00000488298 GARTP22102 1010 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 LRPAP1P30533 357 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 SYKP43405 635 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 ACOT2P49753 483 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 YARSP54577 528 aaKnown RBP13.1□□□□□ -0.31
COL1A2-210ENST00000488298 KYAT1Q16773 422 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 RTP2Q5QGT7 225 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 FAM26FQ5R3K3 315 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 SLFN12LQ6IEE8 588 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 PHLDB3Q6NSJ2 640 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 DCLRE1AQ6PJP8 1040 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 KRBA2Q6ZNG9 492 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 GPR152Q8TDT2 470 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 UROC1Q96N76 676 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 TUBGCP4Q9UGJ1 667 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
COL1A2-210ENST00000488298 FAM186AA6NE01 2351 aa13.1□□□□□ -0.31
COL1A2-210ENST00000488298 ANHXE9PGG2 379 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 ZMYND10O75800 440 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 ZNF202O95125 648 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
COL1A2-210ENST00000488298 MYL1P05976 194 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 DCNP07585 359 aaKnown RBP13.09□□□□□ -0.31
COL1A2-210ENST00000488298 CYP3A5P20815 502 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 FGFR3P22607 806 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 DPYDQ12882 1025 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 STK4Q13043 487 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 PRSS55Q6UWB4 352 aaPredicted RBP13.09□□□□□ -0.31
COL1A2-210ENST00000488298 ERMP1Q7Z2K6 904 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 CEP57Q86XR8 500 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 KIAA0895Q8NCT3 520 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 CXorf38Q8TB03 319 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 LNX1Q8TBB1 728 aaPredicted RBP13.09□□□□□ -0.31
COL1A2-210ENST00000488298 HASPINQ8TF76 798 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 TSPAN18Q96SJ8 248 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 NOTCH4Q99466 2003 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 CBWD1Q9BRT8 395 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 ARHGEF3Q9NR81 526 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 SLC38A7Q9NVC3 462 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 SIT1Q9Y3P8 196 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 NUMBLQ9Y6R0 609 aa13.09□□□□□ -0.31
COL1A2-210ENST00000488298 SF3B1O75533 1304 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL1A2-210ENST00000488298 PODXLO00592 558 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 TBC1D4O60343 1298 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 FSHRP23945 695 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 RPL9P32969 192 aaKnown RBP13.08□□□□□ -0.32
COL1A2-210ENST00000488298 BRCC3P46736 316 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 AARSP49588 968 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL1A2-210ENST00000488298 SPAG1Q07617 926 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 HTR4Q13639 388 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 MRPL58Q14197 206 aaKnown RBP13.08□□□□□ -0.32
COL1A2-210ENST00000488298 POSTNQ15063 836 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 SPATA1Q5VX52 437 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 SCARA3Q6AZY7 606 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
COL1A2-210ENST00000488298 CD302Q8IX05 232 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 EFCAB13Q8IY85 973 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 CEP57L1Q8IYX8 460 aa13.08□□□□□ -0.32
COL1A2-210ENST00000488298 ST13P5Q8NFI4 369 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms