RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 VRTNQ9H8Y1 702 aa16.85■□□□□ 0.29
TM2D1-208ENST00000488206 LZTS1Q9Y250 596 aa16.85■□□□□ 0.29
TM2D1-208ENST00000488206 GTPBP10A4D1E9 387 aaKnown RBP16.84■□□□□ 0.29
TM2D1-208ENST00000488206 LGALS16A8MUM7 142 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 SOX1O00570 391 aaPredicted RBP16.84■□□□□ 0.29
TM2D1-208ENST00000488206 ASS1P00966 412 aaKnown RBP16.84■□□□□ 0.29
TM2D1-208ENST00000488206 ODC1P11926 461 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
TM2D1-208ENST00000488206 SGSM1Q2NKQ1 1148 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 FKBP15Q5T1M5 1219 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 CD300LGQ6UXG3 332 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 DDX53Q86TM3 631 aaKnown RBP16.84■□□□□ 0.29
TM2D1-208ENST00000488206 SUSD3Q96L08 255 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 XYLT2Q9H1B5 865 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 VPS16Q9H269 839 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 ZNF576Q9H609 170 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 RAB20Q9NX57 234 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 GCNT4Q9P109 453 aa16.84■□□□□ 0.29
TM2D1-208ENST00000488206 PUF60Q9UHX1 559 aaKnown RBP16.84■□□□□ 0.29
TM2D1-208ENST00000488206 LRRC10BA6NIK2 292 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 KPNA7A9QM74 516 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 H3BNC9 293 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 M0QZQ0 153 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 SYN3O14994 580 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 SPTLC1O15269 473 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 CST3P01034 146 aaPredicted RBP16.83■□□□□ 0.28
TM2D1-208ENST00000488206 SOD2P04179 222 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 P4HA1P13674 534 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 BRCC3P46736 316 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 TSC2P49815 1807 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 TNNC1P63316 161 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 GPM6BQ13491 265 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 FILIP1LQ4L180 1135 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 TIGD5Q53EQ6 642 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 ZNF667Q5HYK9 610 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 WDR44Q5JSH3 913 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 ZNF697Q5TEC3 545 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 DSTYKQ6XUX3 929 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.83■□□□□ 0.28
TM2D1-208ENST00000488206 GBP6Q6ZN66 633 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 APTXQ7Z2E3 356 aaKnown RBP16.83■□□□□ 0.28
TM2D1-208ENST00000488206 RNF168Q8IYW5 571 aaPredicted RBP16.83■□□□□ 0.28
TM2D1-208ENST00000488206 SENP8Q96LD8 212 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 CERS4Q9HA82 394 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 GDAP2Q9NXN4 497 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 PCDHB8Q9UN66 801 aa16.83■□□□□ 0.28
TM2D1-208ENST00000488206 SCN1AP35498 2009 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 PLXNA4Q9HCM2 1894 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 CHD7Q9P2D1 2997 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 I3L4J1 428 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 EFEMP2O95967 443 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 SERPINC1P01008 464 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 TYMPP19971 482 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 IGFBP6P24592 240 aaPredicted RBP16.82■□□□□ 0.28
TM2D1-208ENST00000488206 EXOC3L4Q17RC7 722 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 USP41Q3LFD5 358 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 HABP4Q5JVS0 413 aaKnown RBP16.82■□□□□ 0.28
TM2D1-208ENST00000488206 FAM171A1Q5VUB5 890 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 SCARA3Q6AZY7 606 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 TOP6BLQ8N6T0 577 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 APPL2Q8NEU8 664 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 SEMA4DQ92854 862 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 VN1R3Q9BXE9 311 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 GPR62Q9BZJ7 368 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 NIF3L1Q9GZT8 377 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 INTS2Q9H0H0 1204 aaKnown RBP16.82■□□□□ 0.28
TM2D1-208ENST00000488206 LMAN2LQ9H0V9 348 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 DSEQ9UL01 958 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 SNX9Q9Y5X1 595 aa16.82■□□□□ 0.28
TM2D1-208ENST00000488206 CYB561D2O14569 222 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 HUS1O60921 280 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 URODP06132 367 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 FGFR3P22607 806 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 GLUD2P49448 558 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 FANCCQ00597 558 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 BMS1Q14692 1282 aaKnown RBP16.81■□□□□ 0.28
TM2D1-208ENST00000488206 WDR72Q3MJ13 1102 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 GPR153Q6NV75 609 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 PDXDC1Q6P996 788 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 GAS2L3Q86XJ1 694 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 VPS52Q8N1B4 723 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 SPATA18Q8TC71 538 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 SPPL3Q8TCT6 385 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 GDPD5Q8WTR4 605 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 POF1BQ8WVV4 589 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 LRCH3Q96II8 777 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 FAXDC2Q96IV6 333 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 NT5C1BQ96P26 610 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 PI4K2AQ9BTU6 479 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 TTPALQ9BTX7 342 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 RBSNQ9H1K0 784 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 ALG13Q9NP73 1137 aaKnown RBP16.81■□□□□ 0.28
TM2D1-208ENST00000488206 TLR9Q9NR96 1032 aa16.81■□□□□ 0.28
TM2D1-208ENST00000488206 A0A1B0GTH6 734 aa16.8■□□□□ 0.28
TM2D1-208ENST00000488206 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
TM2D1-208ENST00000488206 GRM6O15303 877 aa16.8■□□□□ 0.28
TM2D1-208ENST00000488206 CYP11A1P05108 521 aa16.8■□□□□ 0.28
TM2D1-208ENST00000488206 TKTP29401 623 aaKnown RBP16.8■□□□□ 0.28
TM2D1-208ENST00000488206 UBXN1Q04323 297 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms