RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 MXI1P50539 228 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 FXR1P51114 621 aaKnown RBP eCLIP14.33□□□□□ -0.12
COL4A6-207ENST00000487645 CETN1Q12798 172 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 GRIN2CQ14957 1233 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 MAN2A1Q16706 1144 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 PTPROQ16827 1216 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 USP41Q3LFD5 358 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 TIGD5Q53EQ6 642 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 SCARA3Q6AZY7 606 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 VPS52Q8N1B4 723 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 ANKRD20A12PQ8NF67 263 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 FAM200AQ8TCP9 573 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 HASPINQ8TF76 798 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 POF1BQ8WVV4 589 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 FAM84AQ96KN4 292 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 VN1R3Q9BXE9 311 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 HSD3B7Q9H2F3 369 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 VRTNQ9H8Y1 702 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 NGRNQ9NPE2 291 aaKnown RBP14.33□□□□□ -0.12
COL4A6-207ENST00000487645 CHST7Q9NS84 486 aa14.33□□□□□ -0.12
COL4A6-207ENST00000487645 SYN3O14994 580 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 SPTLC1O15269 473 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 LPXNO60711 386 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 HLA-DRAP01903 254 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 FAM163BP0C2L3 166 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 CTSAP10619 480 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 POU3F3P20264 500 aaPredicted RBP14.32□□□□□ -0.12
COL4A6-207ENST00000487645 CDK11BP21127 795 aaKnown RBP14.32□□□□□ -0.12
COL4A6-207ENST00000487645 FGFR3P22607 806 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 DNAJB1P25685 340 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 BRCC3P46736 316 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 MYL6P60660 151 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 TPM4P67936 248 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 CAMK1Q14012 370 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 CBWD6Q4V339 395 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 VWA3BQ502W6 1294 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 HSP90AA4PQ58FG1 418 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 CBWD3Q5JTY5 395 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 CBWD5Q5RIA9 395 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 FAM171A1Q5VUB5 890 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 PDXDC1Q6P996 788 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 DSTYKQ6XUX3 929 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.32□□□□□ -0.12
COL4A6-207ENST00000487645 DPH6Q7L8W6 267 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 TAS1R1Q7RTX1 841 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 FBXL13Q8NEE6 735 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 APPL2Q8NEU8 664 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 MRPL38Q96DV4 380 aaKnown RBP14.32□□□□□ -0.12
COL4A6-207ENST00000487645 FAXDC2Q96IV6 333 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 SENP8Q96LD8 212 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 HERC2P3Q9BVR0 1158 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 XYLT2Q9H1B5 865 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 MMRN2Q9H8L6 949 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 TLR9Q9NR96 1032 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 RAB20Q9NX57 234 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 LIMA1Q9UHB6 759 aaKnown RBP14.32□□□□□ -0.12
COL4A6-207ENST00000487645 PCDHB8Q9UN66 801 aa14.32□□□□□ -0.12
COL4A6-207ENST00000487645 COL4A4P53420 1690 aaPredicted RBP14.32□□□□□ -0.12
COL4A6-207ENST00000487645 MTCL1Q9Y4B5 1905 aaKnown RBP14.31□□□□□ -0.12
COL4A6-207ENST00000487645 GTPBP10A4D1E9 387 aaKnown RBP14.31□□□□□ -0.12
COL4A6-207ENST00000487645 GOLGA6L19H0YKK7 550 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 RFXAPO00287 272 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 CYB561D2O14569 222 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 FSCN2O14926 492 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 CXCL14O95715 111 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 ASS1P00966 412 aaKnown RBP14.31□□□□□ -0.12
COL4A6-207ENST00000487645 CYP11A1P05108 521 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 TPM2P07951 284 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 PIK3CAP42336 1068 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 ERVFC1P60507 584 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 DSG1Q02413 1049 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 KIAA0319Q5VV43 1072 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 KIAA1841Q6NSI8 718 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 TMC7Q7Z402 723 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 LUZP1Q86V48 1076 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 CCDC150Q8NCX0 1101 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 TAS1R2Q8TE23 839 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 GDPD5Q8WTR4 605 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 TTPALQ9BTX7 342 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 IMPG2Q9BZV3 1241 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 ZBP1Q9H171 429 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 NDST4Q9H3R1 872 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 PRDM12Q9H4Q4 367 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 MRPL17Q9NRX2 175 aaKnown RBP14.31□□□□□ -0.12
COL4A6-207ENST00000487645 DSEQ9UL01 958 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 IRAK3Q9Y616 596 aa14.31□□□□□ -0.12
COL4A6-207ENST00000487645 HUS1O60921 280 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 LILRB3O75022 631 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 ODC1P11926 461 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 TYMPP19971 482 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 GLUD2P49448 558 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 MYL7Q01449 175 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 MRPL58Q14197 206 aaKnown RBP14.3□□□□□ -0.12
COL4A6-207ENST00000487645 SMC1AQ14683 1233 aaKnown RBP14.3□□□□□ -0.12
COL4A6-207ENST00000487645 KRT31Q15323 416 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 ZNF699Q32M78 642 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 WDR72Q3MJ13 1102 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 WDR44Q5JSH3 913 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 MIIPQ5JXC2 388 aa14.3□□□□□ -0.12
COL4A6-207ENST00000487645 LIMS2Q7Z4I7 341 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms