RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ANKRD63C9JTQ0 380 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
VPS16-208ENST00000487461 OR4Q2P0C623 313 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 CPB1P15086 417 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 GJA1P17302 382 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 NMT1P30419 496 aaKnown RBP13.26□□□□□ -0.29
VPS16-208ENST00000487461 DDIT3P35638 169 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 GTF2BQ00403 316 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 YWHAHQ04917 246 aaPredicted RBP13.26□□□□□ -0.29
VPS16-208ENST00000487461 PPP2R3AQ06190 1150 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 EP300Q09472 2414 aaPredicted RBP13.26□□□□□ -0.29
VPS16-208ENST00000487461 UBXN2BQ14CS0 331 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 ZC2HC1CQ53FD0 456 aaPredicted RBP13.26□□□□□ -0.29
VPS16-208ENST00000487461 CYP4A22Q5TCH4 519 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 SPATA1Q5VX52 437 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 JADE1Q6IE81 842 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 IQCEQ6IPM2 695 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 DSTYKQ6XUX3 929 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 USP49Q70CQ1 688 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 ELMOD1Q8N336 334 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 BEST2Q8NFU1 509 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 KCNG4Q8TDN1 519 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 TSPAN18Q96SJ8 248 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 MSTO1Q9BUK6 570 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 OSBPL6Q9BZF3 934 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 SEMA4AQ9H3S1 761 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 ZFP14Q9HCL3 533 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 LTB4R2Q9NPC1 389 aa13.26□□□□□ -0.29
VPS16-208ENST00000487461 CPSF3Q9UKF6 684 aaKnown RBP13.26□□□□□ -0.29
VPS16-208ENST00000487461 VPS13AQ96RL7 3174 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 TISP43B9A030 160 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 SPTLC1O15269 473 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 LMNAP02545 664 aaKnown RBP13.25□□□□□ -0.29
VPS16-208ENST00000487461 MYL4P12829 197 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 SCP2P22307 547 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 TARSP26639 723 aaKnown RBP13.25□□□□□ -0.29
VPS16-208ENST00000487461 EPHA5P54756 1037 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 LILRA4P59901 499 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 DUSP4Q13115 394 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 FZD5Q13467 585 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 CUL4AQ13619 759 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 GRM2Q14416 872 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 TPRG1Q6ZUI0 275 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 USP37Q86T82 979 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 RASSF8Q8NHQ8 419 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 LARP4BQ92615 738 aaKnown RBP13.25□□□□□ -0.29
VPS16-208ENST00000487461 EPSTI1Q96J88 318 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 PGLYRP2Q96PD5 576 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 LRRC3Q9BY71 257 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 OXCT2Q9BYC2 517 aaPredicted RBP13.25□□□□□ -0.29
VPS16-208ENST00000487461 BCO2Q9BYV7 579 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 CCSER1Q9C0I3 900 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 CRISPLD1Q9H336 500 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 HEBP1Q9NRV9 189 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.25□□□□□ -0.29
VPS16-208ENST00000487461 CLIC4Q9Y696 253 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 GVINP1Q7Z2Y8 2422 aa13.25□□□□□ -0.29
VPS16-208ENST00000487461 SPTBN4Q9H254 2564 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 OR6C75A6NL08 312 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 PIRO00625 290 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 XPOTO43592 962 aaKnown RBP13.24□□□□□ -0.29
VPS16-208ENST00000487461 NFICP08651 508 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 TYMPP19971 482 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 VIPR2P41587 438 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 ACOT2P49753 483 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 GPR17Q13304 367 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 PTPAQ15257 358 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 C9orf57Q5W0N0 161 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 CENPPQ6IPU0 288 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 VITQ6UXI7 678 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 MAP4K3Q8IVH8 894 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 CD302Q8IX05 232 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 ATAD1Q8NBU5 361 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 SMARCD2Q92925 531 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 CLDN23Q96B33 292 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 SENP8Q96LD8 212 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 TMEM209Q96SK2 561 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 NELL2Q99435 816 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 TRMT61BQ9BVS5 477 aaKnown RBP13.24□□□□□ -0.29
VPS16-208ENST00000487461 DNAJC25Q9H1X3 360 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 IKZF4Q9H2S9 585 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 ASAH2Q9NR71 780 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 SPATA6Q9NWH7 488 aaPredicted RBP13.24□□□□□ -0.29
VPS16-208ENST00000487461 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 YIPF1Q9Y548 306 aa13.24□□□□□ -0.29
VPS16-208ENST00000487461 PDCD11Q14690 1871 aaKnown RBP13.23□□□□□ -0.29
VPS16-208ENST00000487461 ANO9A1A5B4 782 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 VPS37CA5D8V6 355 aaPredicted RBP13.23□□□□□ -0.29
VPS16-208ENST00000487461 LAMTOR5O43504 91 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 TBCAO75347 108 aaKnown RBP13.23□□□□□ -0.29
VPS16-208ENST00000487461 MYBPC2Q14324 1141 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 TEAD2Q15562 447 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 ADALQ6DHV7 355 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 OVOS1Q6IE37 1185 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 ZNF852Q6ZMS4 543 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 DYMQ7RTS9 669 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 ZNF720Q7Z2F6 126 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 ZNF687Q8N1G0 1237 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms