RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 GLIS3Q8NEA6 775 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 SMG7Q92540 1137 aaKnown RBP11.11□□□□□ -0.63
RNF220-215ENST00000487332 EDAQ92838 391 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 CCDC34Q96HJ3 373 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 IKZF4Q9H2S9 585 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 AGPAT3Q9NRZ7 376 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 EXOC1Q9NV70 894 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 EPS15L1Q9UBC2 864 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 HSFX1Q9UBD0 423 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 AFF4Q9UHB7 1163 aaKnown RBP11.11□□□□□ -0.63
RNF220-215ENST00000487332 MUTYHQ9UIF7 546 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 CDH22Q9UJ99 828 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 FBXL5Q9UKA1 691 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 ITGA11Q9UKX5 1188 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 CIZ1Q9ULV3 898 aaPredicted RBP11.11□□□□□ -0.63
RNF220-215ENST00000487332 ANK1P16157 1881 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 ZNF233A6NK53 670 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 RHOBTB3O94955 611 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 KIF20AO95235 890 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 AFMP43652 599 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 GUCY2FP51841 1108 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 NDUFA8P51970 172 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 ZXDAP98168 799 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 KCNB1Q14721 858 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 KNOP1Q1ED39 458 aaKnown RBP11.1□□□□□ -0.63
RNF220-215ENST00000487332 SV2CQ496J9 727 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 WDR49Q8IV35 697 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 SLC9A9Q8IVB4 645 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 KIAA0895Q8NCT3 520 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 CXorf38Q8TB03 319 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 SLC7A14Q8TBB6 771 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 CACTINQ8WUQ7 758 aaKnown RBP11.1□□□□□ -0.63
RNF220-215ENST00000487332 HPS3Q969F9 1004 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 FAM212AQ96EL1 285 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 SAAL1Q96ER3 474 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 BLZF1Q9H2G9 400 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 DPP3Q9NY33 737 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.1□□□□□ -0.63
RNF220-215ENST00000487332 HSPBP1Q9NZL4 362 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 IGSF9Q9P2J2 1179 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 SORCS3Q9UPU3 1222 aa11.1□□□□□ -0.63
RNF220-215ENST00000487332 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
RNF220-215ENST00000487332 PPEF2O14830 753 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 PRPF40AO75400 957 aaKnown RBP11.09□□□□□ -0.63
RNF220-215ENST00000487332 WEE2P0C1S8 567 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 WNT7BP56706 349 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 SIGLEC14Q08ET2 396 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 SMARCB1Q12824 385 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 DPYDQ12882 1025 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 GPR17Q13304 367 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 MTMR3Q13615 1198 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 NFIL3Q16649 462 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 OVOS1Q6IE37 1185 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 DSTYKQ6XUX3 929 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 KRBA2Q6ZNG9 492 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 USP37Q86T82 979 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 C1orf127Q8N9H9 656 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 FSIP1Q8NA03 581 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 XXYLT1Q8NBI6 393 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 LEMD2Q8NC56 503 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 CCDC47Q96A33 483 aaKnown RBP11.09□□□□□ -0.63
RNF220-215ENST00000487332 BORCS6Q96GS4 357 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 ANKRD36BP1Q96IX9 119 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 SENP8Q96LD8 212 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 GOLPH3LQ9H4A5 285 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 PIDD1Q9HB75 910 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 GDAP2Q9NXN4 497 aa11.09□□□□□ -0.63
RNF220-215ENST00000487332 MTCL1Q9Y4B5 1905 aaKnown RBP11.09□□□□□ -0.63
RNF220-215ENST00000487332 C2orf16Q68DN1 1984 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 KPNA7A9QM74 516 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 SPTLC1O15269 473 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 N4BP1O75113 896 aaKnown RBP11.08□□□□□ -0.64
RNF220-215ENST00000487332 MICAL2O94851 1124 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 LRG1P02750 347 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 RPN1P04843 607 aaKnown RBP11.08□□□□□ -0.64
RNF220-215ENST00000487332 TMEM191BP0C7N4 346 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 SPATA31D3P0C874 917 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 CPB1P15086 417 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 CASP1P29466 404 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 ELF1P32519 619 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 ENPEPQ07075 957 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 STK4Q13043 487 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 PLD1Q13393 1074 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 PSMD6Q15008 389 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 SNRNP35Q16560 246 aaKnown RBP11.08□□□□□ -0.64
RNF220-215ENST00000487332 SPATA31D4Q6ZUB0 917 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 CBWD2Q8IUF1 395 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 ELOA2Q8IYF1 753 aaPredicted RBP11.08□□□□□ -0.64
RNF220-215ENST00000487332 GRAMD1CQ8IYS0 662 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 ZSWIM2Q8NEG5 633 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 FEZF2Q8TBJ5 459 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 C2orf15Q8WU43 125 aaKnown RBP11.08□□□□□ -0.64
RNF220-215ENST00000487332 CHAMP1Q96JM3 812 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 LRFN3Q9BTN0 628 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 KCNH6Q9H252 994 aa11.08□□□□□ -0.64
RNF220-215ENST00000487332 KCTD10Q9H3F6 313 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms