RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ANKFY1Q9P2R3 1169 aa21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 NOL7Q9UMY1 257 aaKnown RBP21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 TOM1L1O75674 476 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 VNN2O95498 520 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 MARCKSP29966 332 aaPredicted RBP21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 CXCL12P48061 93 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 GNL2Q13823 731 aaKnown RBP21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 NOLC1Q14978 699 aaKnown RBP eCLIP21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 PRR23BQ6ZRT6 265 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 C1orf186Q6ZWK4 172 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 LRRC3Q9BY71 257 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 RAB34Q9BZG1 259 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 GPR88Q9GZN0 384 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 SLITRK6Q9H5Y7 841 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 C17orf75Q9HAS0 396 aa21.22■□□□□ 0.99
SMPDL3A-202ENST00000487215 SFI1A8K8P3 1242 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 KRT37O76014 449 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 RETP07949 1114 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 OR4Q2P0C623 313 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 MLLT6P55198 1093 aaPredicted RBP21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 YWHAHQ04917 246 aaPredicted RBP21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 DMWDQ09019 674 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 PTGDRQ13258 359 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 KCNK18Q7Z418 384 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 TMC8Q8IU68 726 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 CSGALNACT1Q8TDX6 532 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 E2F7Q96AV8 911 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 PGLYRP2Q96PD5 576 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 LLPHQ9BRT6 129 aaKnown RBP21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 NTPCRQ9BSD7 190 aaKnown RBP21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 DNAJC25Q9H1X3 360 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 CRISPLD1Q9H336 500 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 TIMM13Q9Y5L4 95 aaPredicted RBP21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 F5P12259 2224 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 CITO14578 2027 aa21.21■□□□□ 0.99
SMPDL3A-202ENST00000487215 A0A1W2PRU2 124 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 M0QZQ0 153 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 EIF5BO60841 1220 aaKnown RBP21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 OAZ2O95190 189 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 CXCL8P10145 99 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 CDC25AP30304 524 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 SPAG1Q07617 926 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 STRN3Q13033 797 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 KRT79Q5XKE5 535 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 YAF2Q8IY57 180 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 SPEM1Q8N4L4 309 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 NETO1Q8TDF5 533 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 SPIRE2Q8WWL2 714 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 MSANTD3Q96H12 275 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 RBM12Q9NTZ6 932 aaKnown RBP21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 LIMCH1Q9UPQ0 1083 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 PCDHB6Q9Y5E3 794 aa21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 PDCD11Q14690 1871 aaKnown RBP21.2■□□□□ 0.98
SMPDL3A-202ENST00000487215 SLC38A8A6NNN8 435 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 CHURC1-FNTBB4DL54 471 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 CHADO15335 359 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 HRO43593 1189 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 LRP3O75074 770 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 LRPAP1P30533 357 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 SOX9P48436 509 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 FNTBP49356 437 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 TOB1P50616 345 aaPredicted RBP21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 FCHO2Q0JRZ9 810 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 PLD1Q13393 1074 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 SIM2Q14190 667 aaPredicted RBP21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 LRRC32Q14392 662 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 IL17AQ16552 155 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 WDR44Q5JSH3 913 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 STXBP5Q5T5C0 1151 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 C1orf228Q6PIY5 440 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 ZPBP2Q6X784 338 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 TMEM161BQ8NDZ6 487 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 MMTAG2Q9BU76 263 aaKnown RBP21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 TIPINQ9BVW5 301 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 SEMA4GQ9NTN9 838 aa21.19■□□□□ 0.98
SMPDL3A-202ENST00000487215 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 K7ESF4 209 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 SLC30A4O14863 429 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 ADRB1P08588 477 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 MAPTP10636 758 aaKnown RBP21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 GUCY2CP25092 1073 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 AARSP49588 968 aaKnown RBP eCLIP21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 KPNA1P52294 538 aaPredicted RBP21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 MCL1Q07820 350 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 RAD51AP2Q09MP3 1159 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 DUSP4Q13115 394 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 SRSF5Q13243 272 aaKnown RBP21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 Q6ZS52 159 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 OXCT2Q9BYC2 517 aaPredicted RBP21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 HAPLN2Q9GZV7 340 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 C8orf33Q9H7E9 229 aaPredicted RBP21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 PLEKHA5Q9HAU0 1116 aa21.18■□□□□ 0.98
SMPDL3A-202ENST00000487215 EPG5Q9HCE0 2579 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 CLDN3O15551 220 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 PAPSS2O95340 614 aaPredicted RBP21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 PLS3P13797 630 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 EPHB3P54753 998 aa21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 HMGN5P82970 282 aaKnown RBP21.17■□□□□ 0.98
SMPDL3A-202ENST00000487215 GPR17Q13304 367 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms