RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TWF1Q12792 350 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 SLC44A4Q53GD3 710 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 SPATA1Q5VX52 437 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 TANGO2Q6ICL3 276 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 SFR1Q86XK3 245 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 PANK2Q9BZ23 570 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 CEP72Q9P209 647 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 XPOTO43592 962 aaKnown RBP26.65■■□□□ 1.86
LIME1-206ENST00000487026 VNN2O95498 520 aa26.65■■□□□ 1.86
LIME1-206ENST00000487026 NFICP08651 508 aa26.65■■□□□ 1.86
LIME1-206ENST00000487026 STARD6P59095 220 aa26.65■■□□□ 1.86
LIME1-206ENST00000487026 RRAGBQ5VZM2 374 aa26.65■■□□□ 1.86
LIME1-206ENST00000487026 ADALQ6DHV7 355 aa26.65■■□□□ 1.86
LIME1-206ENST00000487026 ZNF720Q7Z2F6 126 aa26.65■■□□□ 1.86
LIME1-206ENST00000487026 USP37Q86T82 979 aa26.65■■□□□ 1.86
LIME1-206ENST00000487026 BEST2Q8NFU1 509 aa26.65■■□□□ 1.86
LIME1-206ENST00000487026 ZNF512Q96ME7 567 aaPredicted RBP26.65■■□□□ 1.86
LIME1-206ENST00000487026 PGLYRP2Q96PD5 576 aa26.65■■□□□ 1.86
LIME1-206ENST00000487026 VPS13AQ96RL7 3174 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 MYMKA6NI61 221 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 SPTLC1O15269 473 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 GLULP15104 373 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 LILRA4P59901 499 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 PDZD4Q76G19 769 aaPredicted RBP26.64■■□□□ 1.86
LIME1-206ENST00000487026 ELMOD1Q8N336 334 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 SHDQ96IW2 340 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 TBC1D7Q9P0N9 293 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 DLGAP2Q9P1A6 1054 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 STK17AQ9UEE5 414 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 MTMR6Q9Y217 621 aa26.64■■□□□ 1.86
LIME1-206ENST00000487026 PRR23AA6NEV1 266 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 ECI2O75521 394 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 MYL4P12829 197 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 GJA1P17302 382 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 TMEM132DQ14C87 1099 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 MLF2Q15773 248 aaPredicted RBP26.63■■□□□ 1.85
LIME1-206ENST00000487026 CYP4A22Q5TCH4 519 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 C9orf57Q5W0N0 161 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 IQCEQ6IPM2 695 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 SV2BQ7L1I2 683 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 CD302Q8IX05 232 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 PJA1Q8NG27 643 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 USP28Q96RU2 1077 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 TSPAN18Q96SJ8 248 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 BACH2Q9BYV9 841 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 CRISPLD1Q9H336 500 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 ST6GALNAC4Q9H4F1 302 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 AGO2Q9UKV8 859 aaKnown RBP26.63■■□□□ 1.85
LIME1-206ENST00000487026 MAFFQ9ULX9 164 aa26.63■■□□□ 1.85
LIME1-206ENST00000487026 MTF2Q9Y483 593 aaPredicted RBP26.63■■□□□ 1.85
LIME1-206ENST00000487026 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.63■■□□□ 1.85
LIME1-206ENST00000487026 ZNF197O14709 1029 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 CD72P21854 359 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 ABCD1P33897 745 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 DUSP4Q13115 394 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 FAM78AQ5JUQ0 283 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 OVOS1Q6IE37 1185 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 DNAJC19Q96DA6 116 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 SENP8Q96LD8 212 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 ZSWIM3Q96MP5 696 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 STYXL1Q9Y6J8 313 aa26.62■■□□□ 1.85
LIME1-206ENST00000487026 KANSL1LA0AUZ9 987 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 MOSPD3O75425 235 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 TXLNAP40222 546 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 CDR1P51861 262 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 PFKPQ01813 784 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 KCNA1Q09470 495 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 SLFN12LQ6IEE8 588 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 NKD2Q969F2 451 aaPredicted RBP26.61■■□□□ 1.85
LIME1-206ENST00000487026 INTS4Q96HW7 963 aaKnown RBP26.61■■□□□ 1.85
LIME1-206ENST00000487026 TMEM209Q96SK2 561 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 MRPL44Q9H9J2 332 aaKnown RBP26.61■■□□□ 1.85
LIME1-206ENST00000487026 SLC27A5Q9Y2P5 690 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 YIPF1Q9Y548 306 aa26.61■■□□□ 1.85
LIME1-206ENST00000487026 OR6C75A6NL08 312 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 TULP1O00294 542 aaPredicted RBP26.6■■□□□ 1.85
LIME1-206ENST00000487026 PIRO00625 290 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 TYMPP19971 482 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 FCARP24071 287 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 ADSSP30520 456 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 PRKCQQ04759 706 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 GPR17Q13304 367 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 GRM2Q14416 872 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 UBXN2BQ14CS0 331 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 SLC39A14Q15043 492 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 CRELD2Q6UXH1 353 aaPredicted RBP26.6■■□□□ 1.85
LIME1-206ENST00000487026 POMGNT1Q8WZA1 660 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 ELSPBP1Q96BH3 223 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 DDX23Q9BUQ8 820 aaKnown RBP26.6■■□□□ 1.85
LIME1-206ENST00000487026 STRA6Q9BX79 667 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 OXCT2Q9BYC2 517 aaPredicted RBP26.6■■□□□ 1.85
LIME1-206ENST00000487026 ASB7Q9H672 318 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 ASAH2Q9NR71 780 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 DERAQ9Y315 318 aa26.6■■□□□ 1.85
LIME1-206ENST00000487026 PTPRZ1P23471 2315 aaPredicted RBP26.6■■□□□ 1.85
LIME1-206ENST00000487026 RIF1Q5UIP0 2472 aaKnown RBP26.59■■□□□ 1.85
LIME1-206ENST00000487026 CFAP54Q96N23 3096 aa26.59■■□□□ 1.85
LIME1-206ENST00000487026 A0A087X0B3 334 aa26.59■■□□□ 1.85
LIME1-206ENST00000487026 ANO9A1A5B4 782 aa26.59■■□□□ 1.85
LIME1-206ENST00000487026 PPP1R37O75864 691 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms