RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 AGAP9Q5VTM2 703 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 ZNF572Q7Z3I7 529 aaPredicted RBP5.76□□□□□ -1.49
SMC4-218ENST00000486711 RD3Q7Z3Z2 195 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMC4-218ENST00000486711 NTN5Q8WTR8 489 aaPredicted RBP5.76□□□□□ -1.49
SMC4-218ENST00000486711 ASB10Q8WXI3 467 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 SLC9A6Q92581 669 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 NEU1Q99519 415 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 SARGQ9BW04 601 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 ADARB2Q9NS39 739 aaKnown RBP5.76□□□□□ -1.49
SMC4-218ENST00000486711 TDP1Q9NUW8 608 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 PCDHA13Q9Y5I0 950 aa5.76□□□□□ -1.49
SMC4-218ENST00000486711 CXorf49A8MYA2 514 aaPredicted RBP5.75□□□□□ -1.49
SMC4-218ENST00000486711 FAM227AF5H4B4 570 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 SLC16A6O15403 523 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 ADCY6O43306 1168 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 SGTAO43765 313 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 FOSP01100 380 aaPredicted RBP5.75□□□□□ -1.49
SMC4-218ENST00000486711 FTLP02792 175 aaPredicted RBP5.75□□□□□ -1.49
SMC4-218ENST00000486711 MYBP10242 640 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 LMO1P25800 156 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 CXCR5P32302 372 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 FXR1P51114 621 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMC4-218ENST00000486711 MPP3Q13368 585 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 PICALMQ13492 652 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 SAFBQ15424 915 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMC4-218ENST00000486711 SPDYE7PQ495Y7 208 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 COBLL1Q53SF7 1204 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 RSPH3Q86UC2 560 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 RHOT2Q8IXI1 618 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 TRMT2AQ8IZ69 625 aaKnown RBP5.75□□□□□ -1.49
SMC4-218ENST00000486711 OR7D4Q8NG98 312 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 SLC35B2Q8TB61 432 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 NELL1Q92832 810 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 KAT5Q92993 513 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 RGMAQ96B86 450 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 REXO4Q9GZR2 422 aaKnown RBP5.75□□□□□ -1.49
SMC4-218ENST00000486711 BCO1Q9HAY6 547 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.75□□□□□ -1.49
SMC4-218ENST00000486711 POLHQ9Y253 713 aa5.75□□□□□ -1.49
SMC4-218ENST00000486711 TUSC2O75896 110 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 UBXN7O94888 489 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 ESRRBO95718 433 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 ITGAMP11215 1152 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 PHKG2P15735 406 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 RHBDL3P58872 404 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 CDC42EP1Q00587 391 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 SP140Q13342 867 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 CCDC149Q6ZUS6 474 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 CHST15Q7LFX5 561 aaPredicted RBP5.74□□□□□ -1.49
SMC4-218ENST00000486711 DAAM2Q86T65 1068 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 REPS2Q8NFH8 660 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 PJA1Q8NG27 643 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 OR56A1Q8NGH5 318 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 OR2I1PQ8NGU4 316 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 PPP1R35Q8TAP8 253 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 FBXO41Q8TF61 875 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 CYFIP2Q96F07 1278 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 PHACTR3Q96KR7 559 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 PSMD1Q99460 953 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 CGRRF1Q99675 332 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 TMEM60Q9H2L4 133 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 R3HDMLQ9H3Y0 253 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 USP25Q9UHP3 1055 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 FAM50BQ9Y247 325 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 STXBP5LQ9Y2K9 1186 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 SPATA31A6Q5VVP1 1343 aa5.74□□□□□ -1.49
SMC4-218ENST00000486711 TPP1O14773 563 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 ZBED1O96006 694 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 ALDH2P05091 517 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 FDXRP22570 491 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 HTR1BP28222 390 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 RAP2BP61225 183 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 BIRC2Q13490 618 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 SEPT2Q15019 361 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 LLGL1Q15334 1064 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 SYCP2LQ5T4T6 812 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 FBXO42Q6P3S6 717 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 OVCH2Q7RTZ1 564 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 MAPKAPK5Q8IW41 473 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 PQLC1Q8N2U9 271 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 C3orf20Q8ND61 904 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 CCHCR1Q8TD31 782 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 CDK5RAP3Q96JB5 506 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 CLPTM1LQ96KA5 538 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 SENP6Q9GZR1 1112 aaPredicted RBP5.73□□□□□ -1.49
SMC4-218ENST00000486711 PRDM13Q9H4Q3 707 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 LANCL2Q9NS86 450 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 TMEM140Q9NV12 185 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 KLHL11Q9NVR0 708 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 NOX1Q9Y5S8 564 aa5.73□□□□□ -1.49
SMC4-218ENST00000486711 COL11A2P13942 1736 aaPredicted RBP5.72□□□□□ -1.49
SMC4-218ENST00000486711 CAPN8A6NHC0 703 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 WNT10BO00744 389 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 ARIH2O95376 493 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 IFIT2P09913 472 aaKnown RBP5.72□□□□□ -1.49
SMC4-218ENST00000486711 ALOX15P16050 662 aaPredicted RBP5.72□□□□□ -1.49
SMC4-218ENST00000486711 RHCEP18577 417 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 CACNB3P54284 484 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 FAM193AP78312 1265 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms