RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 P4HA1P13674 534 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 MMP8P22894 467 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 AXLP30530 894 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 HOXC8P31273 242 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 CPT1AP50416 773 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 DNA2P51530 1060 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 IGBP1P78318 339 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 ADAM17P78536 824 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 TMEM132AQ24JP5 1023 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 SEZ6Q53EL9 994 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 NAA35Q5VZE5 725 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 RGMBQ6NW40 437 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 C12orf50Q8NA57 414 aaPredicted RBP12.75□□□□□ -0.37
PKP4-213ENST00000486254 MAIP1Q8WWC4 291 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 ZNF606Q8WXB4 792 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 KATNAL1Q9BW62 490 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 LHX5Q9H2C1 402 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 ADAMTS10Q9H324 1103 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 CISHQ9NSE2 258 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 SIX4Q9UIU6 781 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 MROH7Q68CQ1 1323 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 ADCY6O43306 1168 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 THAP12O43422 761 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 MED7O43513 233 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 SPOPO43791 374 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 PROSCO94903 275 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 CHRNA3P32297 505 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
PKP4-213ENST00000486254 DRG2P55039 364 aaKnown RBP12.74□□□□□ -0.37
PKP4-213ENST00000486254 RWDD2BP57060 319 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 SREBF2Q12772 1141 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 MESDQ14696 234 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 HSP90B2PQ58FF3 399 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 ZNF667Q5HYK9 610 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 ALS2CLQ60I27 953 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 SAPCD2Q86UD0 394 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 TLK2Q86UE8 772 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 C1orf127Q8N9H9 656 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 TMEM35BQ8NCS4 154 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 SLCO2A1Q92959 643 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 CYFIP2Q96F07 1278 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 FAM84AQ96KN4 292 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 GCOM2Q9BZD3 368 aaPredicted RBP12.74□□□□□ -0.37
PKP4-213ENST00000486254 RAB17Q9H0T7 212 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.37
PKP4-213ENST00000486254 PARVAQ9NVD7 372 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 ADAM22Q9P0K1 906 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 PCYOX1Q9UHG3 505 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 CPA4Q9UI42 421 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 ANAPC7Q9UJX3 599 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 STRIP2Q9ULQ0 834 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.74□□□□□ -0.37
PKP4-213ENST00000486254 CEP83Q9Y592 693 aa12.74□□□□□ -0.37
PKP4-213ENST00000486254 MYO1FO00160 1098 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 KPNA6O60684 536 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 PHF2O75151 1096 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 VTNP04004 478 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 RPLP2P05387 115 aaKnown RBP12.73□□□□□ -0.37
PKP4-213ENST00000486254 SMIM10L2AP0DMW4 78 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 SMIM10L2BP0DMW5 78 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 RRM1P23921 792 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 OAS2P29728 719 aaKnown RBP12.73□□□□□ -0.37
PKP4-213ENST00000486254 FNTAP49354 379 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 NKX3-2P78367 333 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 GUCY2DQ02846 1103 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 INCA1Q0VD86 236 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 SLC10A6Q3KNW5 377 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 SPDYCQ5MJ68 293 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 LRRC38Q5VT99 294 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 CEP120Q8N960 986 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.73□□□□□ -0.37
PKP4-213ENST00000486254 KAT2BQ92831 832 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 ZFYVE28Q9HCC9 887 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 EPB41L5Q9HCM4 733 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 FAM114A2Q9NRY5 505 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 MTUS1Q9ULD2 1270 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 PDCD11Q14690 1871 aaKnown RBP12.73□□□□□ -0.37
PKP4-213ENST00000486254 CASP8AP2Q9UKL3 1982 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 PASKQ96RG2 1323 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 TCRBV5S1A1TA0A578 114 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 LACTBL1A8MY62 500 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
PKP4-213ENST00000486254 GPR32O75388 356 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 ZMYND10O75800 440 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 NFICP08651 508 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 TNNT3P45378 269 aaPredicted RBP12.73□□□□□ -0.37
PKP4-213ENST00000486254 SLC7A5Q01650 507 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 MAMLD1Q13495 774 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 TMEM132DQ14C87 1099 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 NOTUMQ6P988 496 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 SLC27A1Q6PCB7 646 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 NME8Q8N427 588 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 NIPA2Q8N8Q9 360 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 C1orf131Q8NDD1 294 aaKnown RBP12.73□□□□□ -0.37
PKP4-213ENST00000486254 KRT35Q92764 455 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 CCDC102AQ96A19 550 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 ACAP3Q96P50 834 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms