RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.18□□□□□ -0.94
XRN1-212ENST00000486211 CCNI2Q6ZMN8 369 aaPredicted RBP9.18□□□□□ -0.94
XRN1-212ENST00000486211 ANO5Q75V66 913 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 PDZD4Q76G19 769 aaPredicted RBP9.18□□□□□ -0.94
XRN1-212ENST00000486211 RALYLQ86SE5 291 aaKnown RBP9.18□□□□□ -0.94
XRN1-212ENST00000486211 ABCA7Q8IZY2 2146 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 NCOA7Q8NI08 942 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 PRPF31Q8WWY3 499 aaKnown RBP9.18□□□□□ -0.94
XRN1-212ENST00000486211 CNTNAP5Q8WYK1 1306 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 CPB2Q96IY4 423 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 HHIPQ96QV1 700 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 HNRNPABQ99729 332 aaKnown RBP9.18□□□□□ -0.94
XRN1-212ENST00000486211 UNC45AQ9H3U1 944 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 KLK14Q9P0G3 267 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 BACE2Q9Y5Z0 518 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 WIPF1O43516 503 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 CHMP2AO43633 222 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 EDIL3O43854 480 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 ABLIM3O94929 683 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 AXLP30530 894 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 JAK3P52333 1124 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 INSM1Q01101 510 aaPredicted RBP9.17□□□□□ -0.94
XRN1-212ENST00000486211 ROR1Q01973 937 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 LAMTOR4Q0VGL1 99 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 ELAVL2Q12926 359 aaKnown RBP9.17□□□□□ -0.94
XRN1-212ENST00000486211 TEAD2Q15562 447 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 NAB2Q15742 525 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 TMEM196Q5HYL7 178 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 PLA2G4FQ68DD2 849 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 FSTL4Q6MZW2 842 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 B3GNT9Q6UX72 402 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 CD300LGQ6UXG3 332 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 ZNF605Q86T29 641 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 RAB11FIP4Q86YS3 637 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 PARP9Q8IXQ6 854 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 ZNF843Q8N446 348 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 ZNF461Q8TAF7 563 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 FAM200AQ8TCP9 573 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 SLC5A5Q92911 643 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 E2F7Q96AV8 911 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 CHFRQ96EP1 664 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 ZFYVE19Q96K21 471 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 RIT2Q99578 217 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 CEP72Q9P209 647 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 DKK4Q9UBT3 224 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 EBF1Q9UH73 591 aa9.17□□□□□ -0.94
XRN1-212ENST00000486211 SH2B2O14492 632 aaPredicted RBP9.16□□□□□ -0.94
XRN1-212ENST00000486211 PRRG1O14668 218 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 PTGESO14684 152 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 ATXN7O15265 892 aaPredicted RBP9.16□□□□□ -0.94
XRN1-212ENST00000486211 MSH4O15457 936 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 ATG13O75143 517 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 ERLIN2O94905 339 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 SEC24AO95486 1093 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 ARF4P18085 180 aaPredicted RBP9.16□□□□□ -0.94
XRN1-212ENST00000486211 BCKDHBP21953 392 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 RDXP35241 583 aaKnown RBP9.16□□□□□ -0.94
XRN1-212ENST00000486211 MAPK8P45983 427 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 TNK2Q07912 1038 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 LMAN2Q12907 356 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 CYP4A22Q5TCH4 519 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 SLC8B1Q6J4K2 584 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 YAF2Q8IY57 180 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 TCEAL8Q8IYN2 117 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 FANCBQ8NB91 859 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 RNF149Q8NC42 400 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 RDM1Q8NG50 284 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 SHKBP1Q8TBC3 707 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 PSPC1Q8WXF1 523 aaKnown RBP9.16□□□□□ -0.94
XRN1-212ENST00000486211 ADAMTS14Q8WXS8 1223 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 GJA10Q969M2 543 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 TMEM143Q96AN5 459 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 TMEM209Q96SK2 561 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 JPH2Q9BR39 696 aaPredicted RBP9.16□□□□□ -0.94
XRN1-212ENST00000486211 GLT8D2Q9H1C3 349 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 CXCL16Q9H2A7 254 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 DHX33Q9H6R0 707 aaKnown RBP9.16□□□□□ -0.94
XRN1-212ENST00000486211 BARHL2Q9NY43 387 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 STK17AQ9UEE5 414 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 INVSQ9Y283 1065 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 INSL5Q9Y5Q6 135 aa9.16□□□□□ -0.94
XRN1-212ENST00000486211 KIF26AQ9ULI4 1882 aaPredicted RBP9.16□□□□□ -0.94
XRN1-212ENST00000486211 TNRC6BQ9UPQ9 1833 aaKnown RBP9.15□□□□□ -0.94
XRN1-212ENST00000486211 URB1O60287 2271 aaKnown RBP9.15□□□□□ -0.94
XRN1-212ENST00000486211 A0A087WV48 116 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 TMEM189-UBE2V1I3L0A0 370 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 J3QKU1 62 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 HIP1O00291 1037 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 GAS7O60861 476 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 PSMD10O75832 226 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 CALM1P0DP23 149 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 CALM2P0DP24 149 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 CALM3P0DP25 149 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 ATF2P15336 505 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 ENGP17813 658 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 TKTP29401 623 aaKnown RBP9.15□□□□□ -0.94
XRN1-212ENST00000486211 GBP1P32455 592 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 NPEPPSP55786 919 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 PTENP60484 403 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms