RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 MICAL2O94851 1124 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 CXCL8P10145 99 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 ATF2P15336 505 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 IGFBP6P24592 240 aaPredicted RBP7.61□□□□□ -1.19
VPS50-218ENST00000485994 TNFSF9P41273 254 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 MATR3P43243 847 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS50-218ENST00000485994 BRCC3P46736 316 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 PPP2R3AQ06190 1150 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 ENOX2Q16206 610 aaKnown RBP7.61□□□□□ -1.19
VPS50-218ENST00000485994 ZC2HC1CQ53FD0 456 aaPredicted RBP7.61□□□□□ -1.19
VPS50-218ENST00000485994 RESP18Q5W5W9 173 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 TPGS2Q68CL5 300 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 ADALQ6DHV7 355 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 KANK3Q6NY19 840 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 SHC4Q6S5L8 630 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 PRSS55Q6UWB4 352 aaPredicted RBP7.61□□□□□ -1.19
VPS50-218ENST00000485994 CRELD2Q6UXH1 353 aaPredicted RBP7.61□□□□□ -1.19
VPS50-218ENST00000485994 RSPO2Q6UXX9 243 aaPredicted RBP7.61□□□□□ -1.19
VPS50-218ENST00000485994 CCDC149Q6ZUS6 474 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 SFR1Q86XK3 245 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 CEP57Q86XR8 500 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 TCEAL8Q8IYN2 117 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 ZNF507Q8TCN5 953 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 TMEM174Q8WUU8 243 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 C18orf25Q96B23 403 aaPredicted RBP7.61□□□□□ -1.19
VPS50-218ENST00000485994 MFSD14AQ96MC6 490 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 MSTO1Q9BUK6 570 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 APOL5Q9BWW9 433 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 PANK2Q9BZ23 570 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 TRIM9Q9C026 710 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 MRPL44Q9H9J2 332 aaKnown RBP7.61□□□□□ -1.19
VPS50-218ENST00000485994 GOLGA2P5Q9HBQ8 144 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 AVENQ9NQS1 362 aaPredicted RBP7.61□□□□□ -1.19
VPS50-218ENST00000485994 ANKFY1Q9P2R3 1169 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 CACNG4Q9UBN1 327 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 SORCS3Q9UPU3 1222 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 C2CD2Q9Y426 696 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 NUB1Q9Y5A7 615 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 FAM237AA0A1B0GTK4 181 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 EIF3DO15371 548 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS50-218ENST00000485994 ADAM12O43184 909 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 XYLBO75191 536 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 RFPL2O75678 378 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 IL18RAPO95256 599 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 CYP11A1P05108 521 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 MYL1P05976 194 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 SPATA31D3P0C874 917 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 RPL17P18621 184 aaKnown RBP7.6□□□□□ -1.19
VPS50-218ENST00000485994 TYMPP19971 482 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 CMA1P23946 247 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 TKTP29401 623 aaKnown RBP7.6□□□□□ -1.19
VPS50-218ENST00000485994 LILRA4P59901 499 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 EHHADHQ08426 723 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 SMARCB1Q12824 385 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 SEZ6Q53EL9 994 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 SPATA31D4Q6ZUB0 917 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 STXBP4Q6ZWJ1 553 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 PDILTQ8N807 584 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 TDRD5Q8NAT2 981 aaKnown RBP7.6□□□□□ -1.19
VPS50-218ENST00000485994 BEST2Q8NFU1 509 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 HASPINQ8TF76 798 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 SMG7Q92540 1137 aaKnown RBP7.6□□□□□ -1.19
VPS50-218ENST00000485994 ASIC4Q96FT7 647 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 B3GALT6Q96L58 329 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 ZHX3Q9H4I2 956 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 KIAA1586Q9HCI6 787 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 FAM13BQ9NYF5 915 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 CGNQ9P2M7 1197 aaKnown RBP7.6□□□□□ -1.19
VPS50-218ENST00000485994 HSFX1Q9UBD0 423 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 LIMD1Q9UGP4 676 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 AFF4Q9UHB7 1163 aaKnown RBP7.6□□□□□ -1.19
VPS50-218ENST00000485994 USP25Q9UHP3 1055 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 KCNH3Q9ULD8 1083 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 ZDHHC9Q9Y397 364 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 ATP6V1DQ9Y5K8 247 aa7.6□□□□□ -1.19
VPS50-218ENST00000485994 F5P12259 2224 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 CLUHO75153 1309 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 TMEM221A6NGB7 291 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 OR6C75A6NL08 312 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 ANHXE9PGG2 379 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 M0R296 226 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 POLR2DO15514 142 aaKnown RBP7.59□□□□□ -1.19
VPS50-218ENST00000485994 N4BP1O75113 896 aaKnown RBP7.59□□□□□ -1.19
VPS50-218ENST00000485994 GCNT3O95395 438 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 C8AP07357 584 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 WEE2P0C1S8 567 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 FAM163BP0C2L3 166 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 SLFN14P0C7P3 912 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 HARSP12081 509 aaKnown RBP7.59□□□□□ -1.19
VPS50-218ENST00000485994 LAMP2P13473 410 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 IDEP14735 1019 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 PTPN2P17706 415 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 ACOT2P49753 483 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 KCNA1Q09470 495 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 PSMD2Q13200 908 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 GPR17Q13304 367 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 TDGQ13569 410 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 MTMR3Q13615 1198 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 PKP1Q13835 747 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 MYBPC2Q14324 1141 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms