RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
HDAC7-223ENST00000485796 RNF168Q8IYW5 571 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-223ENST00000485796 POF1BQ8WVV4 589 aa13.67□□□□□ -0.22
HDAC7-223ENST00000485796 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
HDAC7-223ENST00000485796 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
HDAC7-223ENST00000485796 TMEM8AQ9HCN3 771 aa13.67□□□□□ -0.22
HDAC7-223ENST00000485796 POLIQ9UNA4 740 aa13.67□□□□□ -0.22
HDAC7-223ENST00000485796 NLRC5Q86WI3 1866 aa13.67□□□□□ -0.22
HDAC7-223ENST00000485796 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
HDAC7-223ENST00000485796 TPM2P07951 284 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 TKTP29401 623 aaKnown RBP13.66□□□□□ -0.22
HDAC7-223ENST00000485796 TAF6P49848 677 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 COPB1P53618 953 aaKnown RBP13.66□□□□□ -0.22
HDAC7-223ENST00000485796 AP3M2P53677 418 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 ADGRE1Q14246 886 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 MAN2A1Q16706 1144 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 RTP2Q5QGT7 225 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 FAM171A1Q5VUB5 890 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 KRT39Q6A163 491 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 DDX53Q86TM3 631 aaKnown RBP13.66□□□□□ -0.22
HDAC7-223ENST00000485796 TATDN2Q93075 761 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 HPDLQ96IR7 371 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 SENP8Q96LD8 212 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 SAMD11Q96NU1 681 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 CRACR2AQ9BSW2 395 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 VPS16Q9H269 839 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 LIMA1Q9UHB6 759 aaKnown RBP13.66□□□□□ -0.22
HDAC7-223ENST00000485796 RWDD3Q9Y3V2 267 aa13.66□□□□□ -0.22
HDAC7-223ENST00000485796 HCRTO43612 131 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 SERPINC1P01008 464 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 PPM1AP35813 382 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 PIK3CAP42336 1068 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 MYL7Q01449 175 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 LRMPQ12912 555 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 TRPC3Q13507 836 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 VWA3BQ502W6 1294 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 DPY19L2P1Q6NXN4 242 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 PRSS55Q6UWB4 352 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-223ENST00000485796 OSTM1Q86WC4 334 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 VPS52Q8N1B4 723 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 LRRC52Q8N7C0 313 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 LMO3Q8TAP4 145 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 SUSD3Q96L08 255 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 C11orf84Q9BUA3 381 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-223ENST00000485796 HERC2P3Q9BVR0 1158 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 ZBP1Q9H171 429 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 SDCBP2Q9H190 292 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 COQ4Q9Y3A0 265 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 R3HCC1Q9Y3T6 440 aaKnown RBP13.65□□□□□ -0.22
HDAC7-223ENST00000485796 NUB1Q9Y5A7 615 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 PLXNA4Q9HCM2 1894 aa13.65□□□□□ -0.22
HDAC7-223ENST00000485796 HIDE1A8MVS5 230 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 KPNA7A9QM74 516 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 M0QZQ0 153 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 C2CD2LO14523 706 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 CYB561D2O14569 222 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 FSCN2O14926 492 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 ADAM12O43184 909 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 LILRB3O75022 631 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 N4BP1O75113 896 aaKnown RBP13.64□□□□□ -0.23
HDAC7-223ENST00000485796 CLSTN1O94985 981 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
HDAC7-223ENST00000485796 SOD2P04179 222 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 RPL17P18621 184 aaKnown RBP13.64□□□□□ -0.23
HDAC7-223ENST00000485796 FGFR3P22607 806 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 RAP1GAPP47736 663 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 KLK7P49862 253 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 CDR1P51861 262 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 FANCCQ00597 558 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 PLCB2Q00722 1185 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 KRT17Q04695 432 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 KIAA0319Q5VV43 1072 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 PLPP4Q5VZY2 271 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 WSCD1Q658N2 575 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 RSPO2Q6UXX9 243 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-223ENST00000485796 DSTYKQ6XUX3 929 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 CEP57Q86XR8 500 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 FBXL13Q8NEE6 735 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 NAP1L5Q96NT1 182 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-223ENST00000485796 NDST4Q9H3R1 872 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 CHST7Q9NS84 486 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 RAB20Q9NX57 234 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 NXF1Q9UBU9 619 aaKnown RBP13.64□□□□□ -0.23
HDAC7-223ENST00000485796 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 L1RE1Q9UN81 338 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-223ENST00000485796 SNX9Q9Y5X1 595 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 TRANK1O15050 2925 aa13.64□□□□□ -0.23
HDAC7-223ENST00000485796 SF3B1O75533 1304 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC7-223ENST00000485796 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
HDAC7-223ENST00000485796 VWA8A3KMH1 1905 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 LRRC10BA6NIK2 292 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 PMM2O15305 246 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 TEX33O43247 280 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 AP5Z1O43299 807 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 CXCL14O95715 111 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 SLC9A1P19634 815 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 CDH8P55286 799 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms