RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 COLGALT1Q8NBJ5 622 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 BCL7CQ8WUZ0 217 aaPredicted RBP17.02■□□□□ 0.32
APOE-205ENST00000485628 FAM193BQ96PV7 902 aaPredicted RBP17.02■□□□□ 0.32
APOE-205ENST00000485628 TRIM5Q9C035 493 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 FAM124BQ9H5Z6 455 aaPredicted RBP17.02■□□□□ 0.32
APOE-205ENST00000485628 DAAM1Q9Y4D1 1078 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 VWA8A3KMH1 1905 aa17.02■□□□□ 0.31
APOE-205ENST00000485628 NLRC5Q86WI3 1866 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 LINC01553A4QN01 128 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 KPNA7A9QM74 516 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 C5orf67F2Z3F1 127 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 B3GAT3O94766 335 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 CYP11A1P05108 521 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 KRT19P08727 400 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 LAG3P18627 525 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 CDC25BP30305 580 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 ASPAP45381 313 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 NOP14P78316 857 aaKnown RBP17.01■□□□□ 0.31
APOE-205ENST00000485628 GCNT1Q02742 428 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 DPH6Q7L8W6 267 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 ARHGEF19Q8IW93 802 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 SLC39A11Q8N1S5 342 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 RABGGTAQ92696 567 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 JAKMIP2Q96AA8 810 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 ELMO3Q96BJ8 720 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 IGSF21Q96ID5 467 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 SUSD3Q96L08 255 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 ZNF560Q96MR9 790 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 KREMEN1Q96MU8 473 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 APEX2Q9UBZ4 518 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 AJAP1Q9UKB5 411 aaPredicted RBP17.01■□□□□ 0.31
APOE-205ENST00000485628 CNTN6Q9UQ52 1028 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 FAN1Q9Y2M0 1017 aa17.01■□□□□ 0.31
APOE-205ENST00000485628 YBX2Q9Y2T7 364 aaKnown RBP17.01■□□□□ 0.31
APOE-205ENST00000485628 TSC2P49815 1807 aa17■□□□□ 0.31
APOE-205ENST00000485628 A0A1W2PPC1 479 aa17■□□□□ 0.31
APOE-205ENST00000485628 ADCY5O95622 1261 aa17■□□□□ 0.31
APOE-205ENST00000485628 TPM3P06753 285 aa17■□□□□ 0.31
APOE-205ENST00000485628 MYOGP15173 224 aa17■□□□□ 0.31
APOE-205ENST00000485628 UCHL3P15374 230 aa17■□□□□ 0.31
APOE-205ENST00000485628 MYO1EQ12965 1108 aa17■□□□□ 0.31
APOE-205ENST00000485628 SOWAHAQ2M3V2 549 aa17■□□□□ 0.31
APOE-205ENST00000485628 ZNF699Q32M78 642 aa17■□□□□ 0.31
APOE-205ENST00000485628 WDR72Q3MJ13 1102 aa17■□□□□ 0.31
APOE-205ENST00000485628 SV2CQ496J9 727 aa17■□□□□ 0.31
APOE-205ENST00000485628 FIBCD1Q8N539 461 aa17■□□□□ 0.31
APOE-205ENST00000485628 NT5C1BQ96P26 610 aa17■□□□□ 0.31
APOE-205ENST00000485628 ZBED2Q9BTP6 218 aa17■□□□□ 0.31
APOE-205ENST00000485628 COLEC11Q9BWP8 271 aa17■□□□□ 0.31
APOE-205ENST00000485628 VN1R3Q9BXE9 311 aa17■□□□□ 0.31
APOE-205ENST00000485628 EDEM3Q9BZQ6 932 aa17■□□□□ 0.31
APOE-205ENST00000485628 GPR88Q9GZN0 384 aa17■□□□□ 0.31
APOE-205ENST00000485628 SDCBP2Q9H190 292 aa17■□□□□ 0.31
APOE-205ENST00000485628 ADAM28Q9UKQ2 775 aa17■□□□□ 0.31
APOE-205ENST00000485628 CHD7Q9P2D1 2997 aa17■□□□□ 0.31
APOE-205ENST00000485628 A0A1W2PQJ5 194 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 RNF225M0QZC1 329 aaPredicted RBP16.99■□□□□ 0.31
APOE-205ENST00000485628 PES1O00541 588 aaKnown RBP16.99■□□□□ 0.31
APOE-205ENST00000485628 GABRDO14764 452 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 TACC1O75410 805 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 ACO1P21399 889 aaKnown RBP16.99■□□□□ 0.31
APOE-205ENST00000485628 RFX1P22670 979 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 BMPR1AP36894 532 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 PBX3P40426 434 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 OR1G1P47890 313 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 ALDH7A1P49419 539 aaKnown RBP16.99■□□□□ 0.31
APOE-205ENST00000485628 JAM2P57087 298 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 PLCB3Q01970 1234 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 MRPL58Q14197 206 aaKnown RBP16.99■□□□□ 0.31
APOE-205ENST00000485628 ARID5BQ14865 1188 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 ZNF667Q5HYK9 610 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 WDR44Q5JSH3 913 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 SPECC1LQ69YQ0 1117 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 GJB7Q6PEY0 223 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.99■□□□□ 0.31
APOE-205ENST00000485628 TOP6BLQ8N6T0 577 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 SPATA18Q8TC71 538 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 BAP1Q92560 729 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 KAT5Q92993 513 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 SENP8Q96LD8 212 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 ZNF558Q96NG5 402 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 LSM14BQ9BX40 385 aaKnown RBP16.99■□□□□ 0.31
APOE-205ENST00000485628 PBX4Q9BYU1 374 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 GPR62Q9BZJ7 368 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 NIF3L1Q9GZT8 377 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 CYP3A43Q9HB55 503 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 POLIQ9UNA4 740 aa16.99■□□□□ 0.31
APOE-205ENST00000485628 NT5C1B-RDH14C9J2C7 533 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 TYMPP19971 482 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 FGFR3P22607 806 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 PBX2P40425 430 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 BRCC3P46736 316 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 ERVK-21P61565 698 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
APOE-205ENST00000485628 PLCB2Q00722 1185 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 TAP1Q03518 808 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 INCA1Q0VD86 236 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 CUL2Q13617 745 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 IQCEQ6IPM2 695 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 CHRDL2Q6WN34 429 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms