RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 KCTD17Q8N5Z5 321 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 RASSF8Q8NHQ8 419 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 CALML4Q96GE6 196 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 FBXL18Q96ME1 805 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 ACO2Q99798 780 aaKnown RBP11.61□□□□□ -0.55
DDX56-212ENST00000485367 GPR62Q9BZJ7 368 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 C17orf75Q9HAS0 396 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 ARHGAP28Q9P2N2 729 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 ADAM28Q9UKQ2 775 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 TNFSF13BQ9Y275 285 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 ADGRG1Q9Y653 693 aa11.61□□□□□ -0.55
DDX56-212ENST00000485367 SLC26A4O43511 780 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 EFEMP2O95967 443 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 PLS3P13797 630 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 MARCKSP29966 332 aaPredicted RBP11.6□□□□□ -0.55
DDX56-212ENST00000485367 AARSP49588 968 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX56-212ENST00000485367 SMTNP53814 917 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 OSTNP61366 133 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 CACNB1Q02641 598 aaPredicted RBP11.6□□□□□ -0.55
DDX56-212ENST00000485367 GRIN1Q05586 938 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 TMC5Q6UXY8 1006 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 TAS1R3Q7RTX0 852 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 EFCAB13Q8IY85 973 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 KRI1Q8N9T8 703 aaKnown RBP11.6□□□□□ -0.55
DDX56-212ENST00000485367 HASPINQ8TF76 798 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 RIPOR3Q96MK2 946 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 NECTIN4Q96NY8 510 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 PAAF1Q9BRP4 392 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 TCHPQ9BT92 498 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 TARS2Q9BW92 718 aaKnown RBP11.6□□□□□ -0.55
DDX56-212ENST00000485367 NFE2L3Q9Y4A8 694 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 ITIH6Q6UXX5 1313 aa11.6□□□□□ -0.55
DDX56-212ENST00000485367 CTAGE15A4D2H0 777 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 TEX28O15482 410 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 ADH1AP07327 375 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 CTAGE8P0CG41 777 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 MYBP10242 640 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 HARSP12081 509 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 MTHFRP42898 656 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 CLCN4P51793 760 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 SATB1Q01826 763 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 DSG1Q02413 1049 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 STRN3Q13033 797 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 MORC3Q14149 939 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 MCM6Q14566 821 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 CASP8Q14790 479 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 KARSQ15046 597 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 POSTNQ15063 836 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 USP41Q3LFD5 358 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 ZNF568Q3ZCX4 644 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 MAP9Q49MG5 647 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 ARSHQ5FYA8 562 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 HERC4Q5GLZ8 1057 aaPredicted RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 GLRA4Q5JXX5 417 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 ATAT1Q5SQI0 421 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 SWT1Q5T5J6 900 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 CTAGE6Q86UF2 777 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 CNGA4Q8IV77 575 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 SUGP1Q8IWZ8 645 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 CTAGE4Q8IX94 777 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 RNF168Q8IYW5 571 aaPredicted RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 SPIRE2Q8WWL2 714 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 RIN2Q8WYP3 895 aaPredicted RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 CDT1Q9H211 546 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 POMKQ9H5K3 350 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 MRPL44Q9H9J2 332 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 RXFP1Q9HBX9 757 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 CHST7Q9NS84 486 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 DONSONQ9NYP3 566 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 KCND2Q9NZV8 630 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 MAN1B1Q9UKM7 699 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 PLXNA3P51805 1871 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 EIF3CLB5ME19 914 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 KIF4AO95239 1232 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 PLCG1P19174 1290 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 GRM5P41594 1212 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 YARSP54577 528 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 ADKP55263 362 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 ISM2Q6H9L7 571 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 GPBP1Q86WP2 473 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 PALB2Q86YC2 1186 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 EIF3CQ99613 913 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 NTPCRQ9BSD7 190 aaKnown RBP11.59□□□□□ -0.55
DDX56-212ENST00000485367 SFXN1Q9H9B4 322 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 PTPRHQ9HD43 1115 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 ABCB6Q9NP58 842 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 NR2E1Q9Y466 385 aa11.59□□□□□ -0.55
DDX56-212ENST00000485367 SF3B1O75533 1304 aaKnown RBP eCLIP11.58□□□□□ -0.555e-6■■■■■ 61.3
DDX56-212ENST00000485367 PRR33A8MZF0 331 aa11.58□□□□□ -0.56
DDX56-212ENST00000485367 GLUD1P00367 558 aa11.58□□□□□ -0.56
DDX56-212ENST00000485367 KRT18P05783 430 aaKnown RBP11.58□□□□□ -0.56
DDX56-212ENST00000485367 SPATA31D3P0C874 917 aa11.58□□□□□ -0.56
DDX56-212ENST00000485367 MAPTP10636 758 aaKnown RBP11.58□□□□□ -0.56
DDX56-212ENST00000485367 MCF2P10911 925 aa11.58□□□□□ -0.56
DDX56-212ENST00000485367 BMP6P22004 513 aa11.58□□□□□ -0.56
DDX56-212ENST00000485367 GYS2P54840 703 aa11.58□□□□□ -0.56
DDX56-212ENST00000485367 GOLGA8FQ08AF8 430 aa11.58□□□□□ -0.56
DDX56-212ENST00000485367 GOLGA8DPQ0D2H9 430 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms