RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	GOLGA8B	A8MQT2	603 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	VIL1	P09327	827 aa	Known RBP	5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	IFIT1	P09914	478 aa	Known RBP	5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	SDHA	P31040	664 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	GAGE13	Q4V321	117 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	CATSPERE	Q5SY80	951 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	GORAB	Q5T7V8	394 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	DLK2	Q6UY11	383 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	BEND2	Q8NDZ0	799 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	DLG3	Q92796	817 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	NEUROD6	Q96NK8	337 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	SPATA9	Q9BWV2	254 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	CD209	Q9NNX6	404 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	RCAN3	Q9UKA8	241 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	HDAC9	Q9UKV0	1011 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	B3GALT1	Q9Y5Z6	326 aa		5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	BRCA1	P38398	1863 aa	Known RBP	5.77	□□□□□ -1.49
SFPQ-208	ENST00000485365	UTY	O14607	1347 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	MROH5	Q6ZUA9	1318 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	EYA2	O00167	538 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	B3GALT2	O43825	422 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	ADCY3	O60266	1144 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	CELF2	O95319	508 aa	Known RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	SLC5A1	P13866	664 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	NAT1	P18440	290 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	RPS12	P25398	132 aa	Known RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	ZFP36	P26651	326 aa	Known RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	CD38	P28907	300 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	CLK3	P49761	638 aa	Known RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	SUMO1	P63165	101 aa	Known RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	ALDH6A1	Q02252	535 aa	Known RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	PRKG1	Q13976	671 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	STRIP1	Q5VSL9	837 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	NAIF1	Q69YI7	327 aa	Predicted RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	KRT26	Q7Z3Y9	468 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	CKAP2L	Q8IYA6	745 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	MDGA1	Q8NFP4	955 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	NKD2	Q969F2	451 aa	Predicted RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	ZNF669	Q96BR6	464 aa	Predicted RBP	5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	TRIM55	Q9BYV6	548 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	MYOZ2	Q9NPC6	264 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	RIPOR2	Q9Y4F9	1068 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	TAF1	P21675	1872 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	RTL9	Q8NET4	1388 aa		5.76	□□□□□ -1.49
SFPQ-208	ENST00000485365	ANKRD36C	Q5JPF3	1778 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	DLEC1	Q9Y238	1755 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	CCDC88A	Q3V6T2	1871 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	ADM5	C9JUS6	153 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	KIAA0355	O15063	1070 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	SURF6	O75683	361 aa	Known RBP	5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	PDE8B	O95263	885 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	CRTAM	O95727	393 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	ANTXR2	P58335	489 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	TIMM10	P62072	90 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	TFCP2	Q12800	502 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	UBE4A	Q14139	1066 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	PUM3	Q15397	648 aa	Known RBP	5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	DLGAP5	Q15398	846 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	RABL6	Q3YEC7	729 aa	Predicted RBP	5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	MFSD5	Q6N075	450 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	AGBL3	Q8NEM8	1001 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	OR5AN1	Q8NGI8	311 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	DPF2	Q92785	391 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	FAM84B	Q96KN1	310 aa	Predicted RBP	5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	PRDM13	Q9H4Q3	707 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	VEZT	Q9HBM0	779 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	GNL3L	Q9NVN8	582 aa	Known RBP	5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	MED23	Q9ULK4	1368 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	COL4A1	P02462	1669 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	COL4A5	P29400	1685 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	SBF1	O95248	1867 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	FER1L6	Q2WGJ9	1857 aa		5.75	□□□□□ -1.49
SFPQ-208	ENST00000485365	ASTN2	O75129	1339 aa	Predicted RBP	5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	SNED1	Q8TER0	1413 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	DDX60	Q8IY21	1712 aa	Known RBP	5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	TRBV23-1	A0A0A0MS06	115 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	PNMA6E	A0A0J9YXQ4	647 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	CLRN2	A0PK11	232 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	MFAP3L	O75121	409 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	PPFIA4	O75335	1185 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	IPO13	O94829	963 aa	Known RBP	5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	TOX4	O94842	621 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	IL15	P40933	162 aa	Predicted RBP	5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	RFX5	P48382	616 aa	Predicted RBP	5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	TMEM132B	Q14DG7	1078 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	ATP2B3	Q16720	1220 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	DEFB115	Q30KQ5	88 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	CFAP100	Q494V2	611 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	FAM209A	Q5JX71	171 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	MFSD14B	Q5SR56	506 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	DACT2	Q5SW24	774 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	FOXB2	Q5VYV0	432 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	CLEC14A	Q86T13	490 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms