RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 MAN1B1Q9UKM7 699 aa19.21■□□□□ 0.67
SREBF1-213ENST00000485080 BARX2Q9UMQ3 279 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-213ENST00000485080 MAPK8IP1Q9UQF2 711 aa19.21■□□□□ 0.67
SREBF1-213ENST00000485080 FAM50BQ9Y247 325 aa19.21■□□□□ 0.67
SREBF1-213ENST00000485080 H7C4K7 107 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 SPTLC1O15269 473 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 GLUD1P00367 558 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 CYP11A1P05108 521 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 EPCAMP16422 314 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 TAF6P49848 677 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 MORC3Q14149 939 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 SLC8B1Q6J4K2 584 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 EP400NLQ6ZTU2 488 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 RTL10Q7L3V2 364 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 SMYD4Q8IYR2 804 aaPredicted RBP19.2■□□□□ 0.66
SREBF1-213ENST00000485080 TRIML1Q8N9V2 468 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 RDH13Q8NBN7 331 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 CMASQ8NFW8 434 aaPredicted RBP19.2■□□□□ 0.66
SREBF1-213ENST00000485080 NOC3LQ8WTT2 800 aaKnown RBP19.2■□□□□ 0.66
SREBF1-213ENST00000485080 ANKRD36BP1Q96IX9 119 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 ZNF560Q96MR9 790 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 FNBP1Q96RU3 617 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 CGRRF1Q99675 332 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 RHOBTB2Q9BYZ6 727 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 PLEKHA4Q9H4M7 779 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 KIAA1468Q9P260 1216 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 PTPRJQ12913 1337 aa19.2■□□□□ 0.66
SREBF1-213ENST00000485080 MTCL1Q9Y4B5 1905 aaKnown RBP19.19■□□□□ 0.66
SREBF1-213ENST00000485080 TMEM191BP0C7N4 346 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 NR2F2P24468 414 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 KCNQ1P51787 676 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 AP3M2P53677 418 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 RBP5P82980 135 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 PTCRAQ6ISU1 281 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-213ENST00000485080 LLGL2Q6P1M3 1020 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 ELMSAN1Q6PJG2 1045 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 ZC3H3Q8IXZ2 948 aaKnown RBP19.19■□□□□ 0.66
SREBF1-213ENST00000485080 OR5B17Q8NGF7 314 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 TMC2Q8TDI7 906 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 PARD3BQ8TEW8 1205 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 SUSD6Q92537 303 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 DHTKD1Q96HY7 919 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-213ENST00000485080 SENP8Q96LD8 212 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 MTMR12Q9C0I1 747 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 SIX4Q9UIU6 781 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 FRMD4BQ9Y2L6 1034 aa19.19■□□□□ 0.66
SREBF1-213ENST00000485080 MBTPS2O43462 519 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 TGM5O43548 720 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 TNNC2P02585 160 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 ITGB3P05106 788 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 RPL17P18621 184 aaKnown RBP19.18■□□□□ 0.66
SREBF1-213ENST00000485080 BMP6P22004 513 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 POLR2BP30876 1174 aaKnown RBP19.18■□□□□ 0.66
SREBF1-213ENST00000485080 CASP4P49662 377 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 LRRC63Q05C16 580 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 ITIH3Q06033 890 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 STIM1Q13586 685 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 SMAD2Q15796 467 aaKnown RBP19.18■□□□□ 0.66
SREBF1-213ENST00000485080 SV2CQ496J9 727 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 RSPO2Q6UXX9 243 aaPredicted RBP19.18■□□□□ 0.66
SREBF1-213ENST00000485080 CYP26C1Q6V0L0 522 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 DSTYKQ6XUX3 929 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 CSGALNACT2Q8N6G5 542 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 MKNK1Q9BUB5 465 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 ADAM7Q9H2U9 754 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 CLSTN2Q9H4D0 955 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 GDAP2Q9NXN4 497 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 DSEQ9UL01 958 aa19.18■□□□□ 0.66
SREBF1-213ENST00000485080 KPNA7A9QM74 516 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 GOLGA6L22H0YM25 854 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 IKBKBO14920 756 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 ADAM12O43184 909 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 DLATP10515 647 aaKnown RBP19.17■□□□□ 0.66
SREBF1-213ENST00000485080 ODC1P11926 461 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 TNNI1P19237 187 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 YWHAHQ04917 246 aaPredicted RBP19.17■□□□□ 0.66
SREBF1-213ENST00000485080 ADAM9Q13443 819 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 ZNF280DQ6N043 979 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 TRAPPC11Q7Z392 1133 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 USP37Q86T82 979 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 SPATA18Q8TC71 538 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 PLEKHO2Q8TD55 490 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 CCDC127Q96BQ5 260 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 SFXN1Q9H9B4 322 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 PRKAG3Q9UGI9 489 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 FBXW11Q9UKB1 542 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 MAFFQ9ULX9 164 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 AGAP1Q9UPQ3 857 aa19.17■□□□□ 0.66
SREBF1-213ENST00000485080 PPP1R3GB7ZBB8 358 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 PSMA7O14818 248 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 AKAP3O75969 853 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 ABLIM3O94929 683 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 STAU1O95793 577 aaKnown RBP19.16■□□□□ 0.66
SREBF1-213ENST00000485080 CCNE1P24864 410 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 HOXD11P31277 338 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-213ENST00000485080 OR1D2P34982 312 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 PSMC2P35998 433 aaKnown RBP19.16■□□□□ 0.66
SREBF1-213ENST00000485080 FKBP3Q00688 224 aaKnown RBP19.16■□□□□ 0.66
SREBF1-213ENST00000485080 C15orf39Q6ZRI6 1047 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 INTS8Q75QN2 995 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms