RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 TBC1D22BQ9NU19 505 aa9.81□□□□□ -0.84
USP16-206ENST00000485067 SUCLA2Q9P2R7 463 aaPredicted RBP9.81□□□□□ -0.84
USP16-206ENST00000485067 HESX1Q9UBX0 185 aa9.81□□□□□ -0.84
USP16-206ENST00000485067 APEX2Q9UBZ4 518 aa9.81□□□□□ -0.84
USP16-206ENST00000485067 HACL1Q9UJ83 578 aa9.81□□□□□ -0.84
USP16-206ENST00000485067 MAPK13O15264 365 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 EXOC3O60645 756 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 HSF2BPO75031 334 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 PHACTR2O75167 634 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 FDX1P10109 184 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 ITGB5P18084 799 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 MYL7Q01449 175 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 BFSP1Q12934 665 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 PPFIA1Q13136 1202 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 MAPK7Q13164 816 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 DYNC1I2Q13409 638 aaKnown RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 MIS18BP1Q6P0N0 1132 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 CCDC121Q6ZUS5 278 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 TAOK1Q7L7X3 1001 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 IFNL1Q8IU54 200 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 GSPT2Q8IYD1 628 aaKnown RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 MREGQ8N565 214 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 GALNT6Q8NCL4 622 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 CCDC110Q8TBZ0 833 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 ACCSQ96QU6 501 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 NR1H4Q96RI1 486 aaPredicted RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 SH3GL2Q99962 352 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 SH2D3AQ9BRG2 576 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 INTS2Q9H0H0 1204 aaKnown RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 ST6GALNAC4Q9H4F1 302 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 DDX56Q9NY93 547 aaKnown RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 EHD2Q9NZN4 543 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 DNAJC12Q9UKB3 198 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 UBIAD1Q9Y5Z9 338 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 NCANO14594 1321 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 TMEM247A6NEH6 219 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 A6NNZ2 444 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 CCDC188H7C350 402 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 AGPSO00116 658 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 DDX3XO00571 662 aaKnown RBP eCLIP9.8□□□□□ -0.84
USP16-206ENST00000485067 KCNK3O14649 394 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 HEXIM1O94992 359 aaKnown RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 TMEM253P0C7T8 217 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 GZMAP12544 262 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 QARSP47897 775 aaKnown RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 CYP2J2P51589 502 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 TGFB2P61812 414 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 AP2B1P63010 937 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 MTMR2Q13614 643 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 TNFAIP1Q13829 316 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 CLUL1Q15846 466 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 TKFCQ3LXA3 575 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 TUBB8Q3ZCM7 444 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 LDLRAD1Q5T700 205 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 TRMT1LQ7Z2T5 733 aaKnown RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 DGLUCYQ7Z3D6 616 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 PEX26Q7Z412 305 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 OSTM1Q86WC4 334 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 CLEC4DQ8WXI8 215 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 HOOK2Q96ED9 719 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 KIAA1683Q9H0B3 1180 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 AGO4Q9HCK5 861 aaKnown RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 SMARCAL1Q9NZC9 954 aa9.8□□□□□ -0.84
USP16-206ENST00000485067 CNOT7Q9UIV1 285 aaKnown RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 AJAP1Q9UKB5 411 aaPredicted RBP9.8□□□□□ -0.84
USP16-206ENST00000485067 K7ENM7 598 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 PGRMC1O00264 195 aaKnown RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 PMM2O15305 246 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 DHX15O43143 795 aaKnown RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 PEX10O60683 326 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 PLS3P13797 630 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 ATP5DP30049 168 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 TUFMP49411 452 aaKnown RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 COPAP53621 1224 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 SMTNP53814 917 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 ZNF280AP59817 542 aaPredicted RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 DRAP1Q14919 205 aaPredicted RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 BBS9Q3SYG4 887 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 DAW1Q8N136 415 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 U2AF1L4Q8WU68 220 aaKnown RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 SCFD2Q8WU76 684 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 GDAP1L1Q96MZ0 367 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 CCT7Q99832 543 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 NSRP1Q9H0G5 558 aaKnown RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 ALG2Q9H553 416 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 SLC38A10Q9HBR0 1119 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 CORO1CQ9ULV4 474 aaPredicted RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 TMEM150BA6NC51 233 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 PENKP01210 267 aaPredicted RBP9.79□□□□□ -0.84
USP16-206ENST00000485067 GLI1P08151 1106 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 ALAS1P13196 640 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 SFNP31947 248 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 MXI1P50539 228 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 JAK3P52333 1124 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 GUCY2DQ02846 1103 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 MTMR1Q13613 665 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 CUL1Q13616 776 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 KIF22Q14807 665 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 CRY1Q16526 586 aa9.79□□□□□ -0.84
USP16-206ENST00000485067 CBWD6Q4V339 395 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms