RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ALG1L2C9J202 215 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 CD1AP06126 327 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 ZNF37AP17032 561 aaPredicted RBP5.46□□□□□ -1.54
SMC4-215ENST00000484799 C5AR1P21730 350 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 ZNF280AP59817 542 aaPredicted RBP5.46□□□□□ -1.54
SMC4-215ENST00000484799 TARDBPQ13148 414 aaKnown RBP eCLIP5.46□□□□□ -1.54
SMC4-215ENST00000484799 DYRK1AQ13627 763 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 FAM50AQ14320 339 aaKnown RBP5.46□□□□□ -1.54
SMC4-215ENST00000484799 ABCB5Q2M3G0 1257 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 CD300EQ496F6 205 aaPredicted RBP5.46□□□□□ -1.54
SMC4-215ENST00000484799 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 LRFN3Q9BTN0 628 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 FAM126AQ9BYI3 521 aaPredicted RBP5.46□□□□□ -1.54
SMC4-215ENST00000484799 BRD9Q9H8M2 597 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 A0A1W2PS29 197 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 F5H697 171 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 MPPED1O15442 326 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 HTRA2O43464 458 aaPredicted RBP5.45□□□□□ -1.54
SMC4-215ENST00000484799 SLC43A1O75387 559 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 ANXA1P04083 346 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 HMGB1P09429 215 aaKnown RBP5.45□□□□□ -1.54
SMC4-215ENST00000484799 SRGNP10124 158 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 ANXA11P50995 505 aaKnown RBP5.45□□□□□ -1.54
SMC4-215ENST00000484799 SLFN5Q08AF3 891 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 PTPN21Q16825 1174 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 NBPF8Q3BBV2 869 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 SLC30A10Q6XR72 485 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 NSUN7Q8NE18 718 aaKnown RBP5.45□□□□□ -1.54
SMC4-215ENST00000484799 SLC30A5Q8TAD4 765 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 TFAP2BQ92481 460 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 PDLIM2Q96JY6 352 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 TRIB1Q96RU8 372 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 TLR10Q9BXR5 811 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 SIK2Q9H0K1 926 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 IL17RBQ9NRM6 502 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 SEMA4GQ9NTN9 838 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 ASB6Q9NWX5 421 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 POLHQ9Y253 713 aa5.45□□□□□ -1.54
SMC4-215ENST00000484799 CFAP20Q9Y6A4 193 aaKnown RBP5.45□□□□□ -1.54
SMC4-215ENST00000484799 POLRMTO00411 1230 aaKnown RBP5.44□□□□□ -1.54
SMC4-215ENST00000484799 TRIAP1O43715 76 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 CHRM2P08172 466 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 SBK3P0C264 359 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 GPD1P21695 349 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 CYP2C19P33261 490 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 GRIA3P42263 894 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 KHDC1Q4VXA5 237 aaKnown RBP5.44□□□□□ -1.54
SMC4-215ENST00000484799 CCDC157Q569K6 752 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 TSTD2Q5T7W7 516 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 THEMIS2Q5TEJ8 643 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 VWA1Q6PCB0 445 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 TSHZ1Q6ZSZ6 1077 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 MICALCLQ6ZW33 695 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 ZNF365Q70YC5 407 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 CFAP52Q8N1V2 620 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 IFI44Q8TCB0 444 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 KAT5Q92993 513 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 VRK1Q99986 396 aaPredicted RBP5.44□□□□□ -1.54
SMC4-215ENST00000484799 CCDC8Q9H0W5 538 aaPredicted RBP5.44□□□□□ -1.54
SMC4-215ENST00000484799 KLK15Q9H2R5 256 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 SLAMF7Q9NQ25 335 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 FOXJ2Q9P0K8 574 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 CFAP97Q9P2B7 532 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 TUBD1Q9UJT1 453 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 LIMCH1Q9UPQ0 1083 aa5.44□□□□□ -1.54
SMC4-215ENST00000484799 DTNBO60941 627 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 KATNA1O75449 491 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 SNUPNO95149 360 aaKnown RBP5.43□□□□□ -1.54
SMC4-215ENST00000484799 ARIH2O95376 493 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 GATA3P23771 443 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 NXPH1P58417 271 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 ITIH3Q06033 890 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 HLXQ14774 488 aaPredicted RBP5.43□□□□□ -1.54
SMC4-215ENST00000484799 PCBP2Q15366 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
SMC4-215ENST00000484799 DCBLD1Q8N8Z6 715 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 C3orf20Q8ND61 904 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 COA7Q96BR5 231 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 TEKT5Q96M29 485 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 UROC1Q96N76 676 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 KLHL32Q96NJ5 620 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 HAPLN3Q96S86 360 aa5.43□□□□□ -1.54
SMC4-215ENST00000484799 COL11A2P13942 1736 aaPredicted RBP5.43□□□□□ -1.54
SMC4-215ENST00000484799 SBNO2Q9Y2G9 1366 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 PROP1O75360 226 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 POU3F3P20264 500 aaPredicted RBP5.42□□□□□ -1.54
SMC4-215ENST00000484799 IL12RB1P42701 662 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 NPTX2P47972 431 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 PSMC1P62191 440 aaKnown RBP5.42□□□□□ -1.54
SMC4-215ENST00000484799 EXOSC10Q01780 885 aaKnown RBP5.42□□□□□ -1.54
SMC4-215ENST00000484799 MTMR1Q13613 665 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 PTPRRQ15256 657 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 INAVAQ3KP66 663 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 C3orf36Q3SXR2 165 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 PLAC9Q5JTB6 97 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 ZNF362Q5T0B9 420 aaPredicted RBP5.42□□□□□ -1.54
SMC4-215ENST00000484799 TAPT1Q6NXT6 567 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 PDPRQ8NCN5 879 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 TPSD1Q9BZJ3 242 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 SPEF1Q9Y4P9 236 aa5.42□□□□□ -1.54
SMC4-215ENST00000484799 IPPQ9Y573 584 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms